RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 ABHD1Q96SE0 405 aa5.87□□□□□ -1.47
USP46-201ENST00000441222 FUT9Q9Y231 359 aa5.87□□□□□ -1.47
USP46-201ENST00000441222 NDUFA2O43678 99 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 PPP1R17O96001 155 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 CTLA4P16410 223 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 TMEM30BQ3MIR4 351 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 TMEFF2Q9UIK5 374 aaPredicted RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 PHLDA3Q9Y5J5 127 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 TMEM56-RWDD3S4R434 201 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 TRAV30A0A087WSZ9 112 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 IGHV3-43A0A0B4J1X8 118 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 LOC107984156A0A0G2JMH3 177 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 C16orf97H3BN30 126 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 HLA-DQA1P01909 254 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 IGHV3-43DP0DP04 118 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 NMUP48645 174 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 RPL31P62899 125 aaKnown RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 ZXDAP98168 799 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 NAAAQ02083 359 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 UBE2V2Q15819 145 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 PWWP2BQ6NUJ5 590 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 PRNTQ86SH4 94 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 LDLRAD3Q86YD5 345 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 ARL17AQ8IVW1 177 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 LRRC75AQ8NAA5 344 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 VN1R17PQ8TDU5 208 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 PRELID3AQ96N28 172 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 MS4A7Q9GZW8 240 aaPredicted RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 MAP1LC3AQ9H492 121 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 LHX9Q9NQ69 397 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 SIRT5Q9NXA8 310 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 QSER1Q2KHR3 1735 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 ACACAQ13085 2346 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 AHDC1Q5TGY3 1603 aaPredicted RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 LOC102724200A0A096LPH7 203 aaPredicted RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 GAGE10A6NGK3 116 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 IER3P46695 156 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 SPINK9Q5DT21 86 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 PSMG4Q5JS54 123 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 TCF24Q7RTU0 167 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 MARS2Q96GW9 593 aaKnown RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 PGLYRP3Q96LB9 341 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 P2RX4Q99571 388 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 SH3BGRL3Q9H299 93 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 RGPD3A6NKT7 1758 aaPredicted RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 H3BMH7 237 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 NUDT3O95989 172 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 GAPDHP04406 335 aaKnown RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 MFAP2P55001 183 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 WDR25Q64LD2 544 aaPredicted RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 SLC23A3Q6PIS1 610 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 SSMEM1Q8WWF3 244 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 C19orf24Q9BVV8 132 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 OR51B2Q9Y5P1 312 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 NRXN3Q9Y4C0 1643 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 ATRXP46100 2492 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 TMEM189A5PLL7 270 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 HPRT1P00492 218 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 SBK3P0C264 359 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 SOX8P57073 446 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 LOXL3P58215 753 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 RAE1P78406 368 aaKnown RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 FAM109BQ6ICB4 259 aaPredicted RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 TMEM183AQ8IXX5 376 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 MRGPRFQ96AM1 343 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 SGK494Q96LW2 274 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 ELOVL1Q9BW60 279 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 VCX2Q9H322 139 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 SLC25A10Q9UBX3 287 aaPredicted RBP5.86□□□□□ -1.47
USP46-201ENST00000441222 ASB1Q9Y576 335 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 GREB1Q4ZG55 1949 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 PPM1DO15297 605 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 VSTM2LQ96N03 204 aa5.86□□□□□ -1.47
USP46-201ENST00000441222 H3BQ15 152 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 ARG1P05089 322 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 TRGC1P0CF51 173 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 SPNP16150 400 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 TCL1AP56279 114 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 SEZ6L2Q6UXD5 910 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 GAPTQ8N292 157 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 SHANK1Q9Y566 2161 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 A0A1W2PQM1 296 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 LIPT2A6NK58 231 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 MMDQ15546 238 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 CLEC18BQ6UXF7 455 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 NEURL2Q9BR09 285 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 CHST5Q9GZS9 411 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 TMEM140Q9NV12 185 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 A0A0B4J293 547 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 A0A0U1RQV5 110 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 FAM181BA6NEQ2 426 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 FFAR1O14842 300 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 CTSVO60911 334 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 PDCD1Q15116 288 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 PRSS8Q16651 343 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 DMKNQ6E0U4 476 aaPredicted RBP5.85□□□□□ -1.47
USP46-201ENST00000441222 OR4A47Q6IF82 309 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 MRPL54Q6P161 138 aaKnown RBP5.85□□□□□ -1.47
USP46-201ENST00000441222 PQLC2Q6ZP29 291 aa5.85□□□□□ -1.47
USP46-201ENST00000441222 ORAI1Q96D31 301 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms