RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145		A6NLC8	198 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	CNOT4	O95628	575 aa	Known RBP	13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	SRP19	P09132	144 aa	Known RBP	13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	DAO	P14920	347 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	ERVS71-1	P61550	626 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	GUSBP1	Q15486	140 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	IZUMO4	Q1ZYL8	232 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	ZNF506	Q5JVG8	444 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	AKR1C8P	Q5T2L2	129 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	VASH2	Q86V25	355 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	CD300LF	Q8TDQ1	290 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	MALSU1	Q96EH3	234 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	CACNG5	Q9UF02	275 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	TRAPPC2L	Q9UL33	140 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145		R4GN57	208 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	MED12L	Q86YW9	2145 aa		13.58	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	IDH3G	P51553	393 aa	Predicted RBP	13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	TGFBR3	Q03167	851 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	ICAM4	Q14773	271 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	ALKBH6	Q3KRA9	238 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	ZNF561	Q8N587	486 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	SLC25A40	Q8TBP6	338 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	ISOC2	Q96AB3	205 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	UNKL	Q9H9P5	680 aa	Known RBP	13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	LIN7C	Q9NUP9	197 aa	Known RBP	13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	TMEM210	A6NLX4	147 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	CDIPT	O14735	213 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	SH2D1B	O14796	132 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	SYNGR2	O43760	224 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	NXPH2	O95156	264 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	IGHG3	P01860	377 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	HBE1	P02100	147 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	HSPB1	P04792	205 aa	Known RBP	13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	RAB5A	P20339	215 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	TNFSF10	P50591	281 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	TLE4	Q04727	773 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	CLDND2	Q8NHS1	167 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	RBMXL1	Q96E39	390 aa	Known RBP	13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	PPP1R3C	Q9UQK1	317 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	DOCK7	Q96N67	2140 aa		13.57	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	C5orf52	A6NGY3	159 aa		13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	SCAF4	O95104	1147 aa	Known RBP	13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	SELE	P16581	610 aa		13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	UBE2N	P61088	152 aa	Known RBP	13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	PSG7	Q13046	419 aa		13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	INO80C	Q6PI98	192 aa	Predicted RBP	13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	DRAM1	Q8N682	238 aa		13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145		H3BP45	60 aa		13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	IFNA5	P01569	189 aa		13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	RPS23	P62266	143 aa	Known RBP	13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	TMPRSS7	Q7RTY8	843 aa		13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	HAPLN4	Q86UW8	402 aa		13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	RNASE11	Q8TAA1	199 aa	Known RBP	13.56	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	KNTC1	P50748	2209 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145		A0A1W2PPE2	198 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	PPIH	O43447	177 aa	Known RBP	13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	HAND1	O96004	215 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	OR8U8	P0C7N1	319 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	ZNF806	P0C7X5	589 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	HOXB1	P14653	301 aa	Predicted RBP	13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	PMP22	Q01453	160 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	ARL16	Q0P5N6	197 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	HAGH	Q16775	308 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145		Q6ZT83	130 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	P4HA3	Q7Z4N8	544 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	THNSL2	Q86YJ6	484 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	ZNF525	Q8N782	197 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	C12orf57	Q99622	126 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	PSMG3	Q9BT73	122 aa	Predicted RBP	13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	TOLLIP	Q9H0E2	274 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	TMEM9B	Q9NQ34	198 aa		13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	FAM90A26	D6RGX4	464 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145		H3BQ15	152 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	UBE2C	O00762	179 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	ARG1	P05089	322 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	CEACAM6	P40199	344 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	SNRPE	P62304	92 aa	Known RBP	13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	ACSF3	Q4G176	576 aa	Predicted RBP	13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	KHDC3L	Q587J8	217 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	FAM214B	Q7L5A3	538 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	PRR18	Q8N4B5	295 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	FAM24B	Q8N5W8	94 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	OR10G4	Q8NGN3	311 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	KCNS2	Q9ULS6	477 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	hCG_1809904	A0A1W2PP81	198 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145		A0A1W2PR64	198 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145		A0A1W2PRV1	198 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	RNF212B	A8MTL3	300 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145		H0YL77	283 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	PSPN	O60542	156 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	LYZL6	O75951	148 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	CBR1	P16152	277 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	MPV17	P39210	176 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	MEOX2	P50222	304 aa		13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.54	□□□□□ -0.24
HLA-DQB2-231	ENST00000435145	KRBOX4	Q5JUW0	171 aa		13.54	□□□□□ -0.24

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