RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 NFYAP23511 347 aaPredicted RBP9.33□□□□□ -0.92
LINC00539-203ENST00000434601 SSTR5P35346 364 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 FXYD4P59646 89 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 CR1LQ2VPA4 569 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 TMEM155Q4W5P6 130 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 LYPD2Q6UXB3 125 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 OR1L1Q8NH94 360 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 OR10J5Q8NHC4 309 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 UBALD1Q8TB05 177 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 DACT3Q96B18 629 aaPredicted RBP9.33□□□□□ -0.92
LINC00539-203ENST00000434601 MOB3AQ96BX8 217 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 DCTN5Q9BTE1 182 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 TMPRSS13Q9BYE2 586 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 YAE1D1Q9NRH1 226 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 ZNF69Q9UC07 566 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 OPN4Q9UHM6 478 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 A0A0A6YYJ9 748 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 FAM172BPA6NC97 362 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 RNF212BA8MTL3 300 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 C15orf65H3BRN8 121 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 DVL1O14640 695 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 SPINT2O43291 252 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 HSPA12AO43301 675 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 FCN3O75636 299 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 TUSC2O75896 110 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 HBZP02008 142 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 VSIG10L2P0DP72 767 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 RPS2P15880 293 aaKnown RBP9.32□□□□□ -0.92
LINC00539-203ENST00000434601 IL2RGP31785 369 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 UCP3P55916 312 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 TMEM33P57088 247 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 DSCR9P59020 149 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 TAS2R31P59538 309 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 BAMBIQ13145 260 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 CARTPTQ16568 116 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 METTL11BQ5VVY1 283 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 GLDNQ6ZMI3 551 aaPredicted RBP9.32□□□□□ -0.92
LINC00539-203ENST00000434601 TCF23Q7RTU1 214 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 H1FOOQ8IZA3 346 aaPredicted RBP9.32□□□□□ -0.92
LINC00539-203ENST00000434601 FGFRL1Q8N441 504 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 SPICQ8N5J4 248 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 MAPK1IP1LQ8NDC0 245 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 TMEM158Q8WZ71 300 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 GALMQ96C23 342 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 SEC22CQ9BRL7 303 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 ALX4Q9H161 411 aaPredicted RBP9.32□□□□□ -0.92
LINC00539-203ENST00000434601 GHITMQ9H3K2 345 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 C5orf66Q9H5L9 145 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 GPN1Q9HCN4 374 aaPredicted RBP9.32□□□□□ -0.92
LINC00539-203ENST00000434601 RAB9BQ9NP90 201 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 OR1A1Q9P1Q5 309 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 LPAR3Q9UBY5 353 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 SLC23A1Q9UHI7 598 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 GPR132Q9UNW8 380 aa9.32□□□□□ -0.92
LINC00539-203ENST00000434601 C14orf166Q9Y224 244 aaKnown RBP9.32□□□□□ -0.92
LINC00539-203ENST00000434601 TRGV10A0A0A0MS01 117 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 hADV38S2A0JD32 116 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 MEX3AA1L020 520 aaKnown RBP9.31□□□□□ -0.92
LINC00539-203ENST00000434601 A8MV72 311 aaPredicted RBP9.31□□□□□ -0.92
LINC00539-203ENST00000434601 SNRPGP15A8MWD9 76 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 CREBL2O60519 120 aaPredicted RBP9.31□□□□□ -0.92
LINC00539-203ENST00000434601 IGHV4-39P01824 125 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 CTSDP07339 412 aaPredicted RBP9.31□□□□□ -0.92
LINC00539-203ENST00000434601 ZNF728P0DKX0 622 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 GZMHP20718 246 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 ZBTB25P24278 435 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 GPR6P46095 362 aaPredicted RBP9.31□□□□□ -0.92
LINC00539-203ENST00000434601 UBE2MP61081 183 aaKnown RBP9.31□□□□□ -0.92
LINC00539-203ENST00000434601 MEF2CQ06413 473 aaPredicted RBP9.31□□□□□ -0.92
LINC00539-203ENST00000434601 CBX3Q13185 183 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 ZNF626Q68DY1 528 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 NLRC3Q7RTR2 1065 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 SLC25A42Q86VD7 318 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 ZNF565Q8N9K5 539 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 OR8B3Q8NGG8 313 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 ZFAND1Q8TCF1 268 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 CHAC2Q8WUX2 184 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 CAPSLQ8WWF8 208 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 H1FXQ92522 213 aaKnown RBP9.31□□□□□ -0.92
LINC00539-203ENST00000434601 CORO2AQ92828 525 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 TOMM40LQ969M1 308 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 ARL11Q969Q4 196 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 OR8B2Q96RD0 313 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 OR51J1Q9H342 316 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 CALYQ9NYX4 217 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 MIOXQ9UGB7 285 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 ZNF221Q9UK13 617 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 LINC00312Q9Y6C7 94 aa9.31□□□□□ -0.92
LINC00539-203ENST00000434601 DSCAML1Q8TD84 2053 aa9.3□□□□□ -0.92
LINC00539-203ENST00000434601 TRBV23-1A0A0A0MS06 115 aa9.3□□□□□ -0.92
LINC00539-203ENST00000434601 ZNF729A6NN14 1252 aaPredicted RBP9.3□□□□□ -0.92
LINC00539-203ENST00000434601 PFDN1O60925 122 aa9.3□□□□□ -0.92
LINC00539-203ENST00000434601 OR4E1P0C645 316 aa9.3□□□□□ -0.92
LINC00539-203ENST00000434601 TRAPPC2P0DI81 140 aa9.3□□□□□ -0.92
LINC00539-203ENST00000434601 TRAPPC2BP0DI82 140 aa9.3□□□□□ -0.92
LINC00539-203ENST00000434601 PI3P19957 117 aa9.3□□□□□ -0.92
LINC00539-203ENST00000434601 RRAS2P62070 204 aaPredicted RBP9.3□□□□□ -0.92
LINC00539-203ENST00000434601 RPL31P62899 125 aaKnown RBP9.3□□□□□ -0.92
LINC00539-203ENST00000434601 HTD2P86397 168 aa9.3□□□□□ -0.92
LINC00539-203ENST00000434601 GNMTQ14749 295 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms