RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 UBE2G2P60604 165 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 HBG1P69891 147 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 HBG2P69892 147 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 HIST3H3Q16695 136 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 CISD2Q8N5K1 135 aaKnown RBP9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 RAB40CQ96S21 281 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 RNF150Q9ULK6 438 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 PPP1R3CQ9UQK1 317 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 ZNF407Q9C0G0 2248 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 AQP7P3A6NL99 342 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 IL3RAP26951 378 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 S100GP29377 79 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 HS3ST6Q96QI5 342 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 RIMS4Q9H426 269 aaPredicted RBP9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 ERRFI1Q9UJM3 462 aaPredicted RBP9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 PTRH2Q9Y3E5 179 aaKnown RBP9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 C2orf16Q68DN1 1984 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 ESPL1Q14674 2120 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 TRAV39A0A0B4J263 110 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 TP53I11O14683 189 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 HS3ST1O14792 307 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 B4GALT1P15291 398 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 F2RP25116 425 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 BRS3P32247 399 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 FASLGP48023 281 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 TMEM240Q5SV17 173 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 ZNF468Q5VIY5 522 aaPredicted RBP9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 RAET1LQ5VY80 246 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 CMTM2Q8TAZ6 248 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 ZCCHC14Q8WYQ9 949 aaKnown RBP9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 FAM103A1Q9BTL3 118 aaKnown RBP9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 LTBP2Q14767 1821 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 A0A1B0GX78 115 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 CLDN1O95832 211 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 HLA-BQ31612 363 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 C11orf42Q8N5U0 333 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 NABP1Q96AH0 204 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 ABHD14BQ96IU4 210 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 IMMP2LQ96T52 175 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 OR2J1Q9GZK6 312 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 FGF21Q9NSA1 209 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 KIR2DL5BA0A0G2JN68 375 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 KIR2DL5BA0A0G2JPC4 375 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 MRPS11P82912 194 aaKnown RBP9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 SERF2P84101 59 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 LRRC75BQ2VPJ9 315 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 KIAA0895LQ68EN5 471 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 HAPLN4Q86UW8 402 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 KIR2DL5AQ8N109 375 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 TAF15Q92804 592 aaKnown RBP eCLIP9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 C10orf35Q96D05 121 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 ANAPC16Q96DE5 110 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 WDR61Q9GZS3 305 aaKnown RBP9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 TUBG2Q9NRH3 451 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 PLSCR2Q9NRY7 297 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 BCL3P20749 454 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 CD82P27701 267 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 FUT6P51993 359 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 ADPRHL1Q8NDY3 354 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 OR5D13Q8NGL4 314 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 OR10G9Q8NGN4 311 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 OR10G7Q8NGN6 311 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 RDH5Q92781 318 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 HSPB9Q9BQS6 159 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 VAMP8Q9BV40 100 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 RYDENQ9NUL5 291 aaKnown RBP9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 KCNS2Q9ULS6 477 aa9.87□□□□□ -0.83
HMGCS1-202ENST00000433297 ZNF32P17041 273 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 SLC38A11Q08AI6 406 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 C1orf53Q5VUE5 145 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 PINX1Q96BK5 328 aaKnown RBP9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 ALKBH3Q96Q83 286 aaPredicted RBP9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 SAMD10Q9BYL1 202 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 ZDHHC11Q9H8X9 412 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 DNAJC4Q9NNZ3 241 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 MRPS18CQ9Y3D5 142 aaKnown RBP9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 PTPRSQ13332 1948 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 DUXBA0A1W2PPF3 345 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 TOX3O15405 576 aaPredicted RBP9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 CDKN1AP38936 164 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 MPLP40238 635 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 PPP1CBP62140 327 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 OR8B8Q15620 311 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 OR2M3Q8NG83 312 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 OR1F12Q8NHA8 337 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 SGMS2Q8NHU3 365 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 RASL10BQ96S79 203 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 MIEN1Q9BRT3 115 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 GPR27Q9NS67 375 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 CABIN1Q9Y6J0 2220 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 IGKV1-6A0A0C4DH72 117 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 CLEC18AA5D8T8 446 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 H0Y980 276 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 CD38P28907 300 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 OTX1P32242 354 aaPredicted RBP9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 HNRNPKP61978 463 aaKnown RBP eCLIP9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 ACSM6Q6P461 480 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 ANKRD37Q7Z713 158 aa9.86□□□□□ -0.83
HMGCS1-202ENST00000433297 CLEC18CQ8NCF0 446 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms