RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ZNF385CQ66K41 422 aaPredicted RBP10.66□□□□□ -0.7
CDH3-202ENST00000429102 MED12LQ86YW9 2145 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 CLDND2Q8NHS1 167 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 KIAA1456Q9P272 454 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 PCNX1Q96RV3 2341 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 NDUFB7P17568 137 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 S100GP29377 79 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 CHRNA7P36544 502 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 PLGLB1Q02325 96 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 LURAP1Q96LR2 239 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 PACRGQ96M98 296 aaPredicted RBP10.65□□□□□ -0.7
CDH3-202ENST00000429102 ELOVL1Q9BW60 279 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 Q9N2K0 584 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 TAAR3PQ9P1P4 343 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 NBASA2RRP1 2371 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 DEGS1O15121 323 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 PITX3O75364 302 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 CDS2O95674 445 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 SNRPCP09234 159 aaKnown RBP10.65□□□□□ -0.7
CDH3-202ENST00000429102 GPX4P36969 197 aaPredicted RBP10.65□□□□□ -0.7
CDH3-202ENST00000429102 TMEM211Q6ICI0 200 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 ODF3L1Q8IXM7 274 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 OR4F5Q8NH21 305 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 CLDN23Q96B33 292 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 ADGRG7Q96K78 797 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 OR4F4Q96R69 305 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 CLN8Q9UBY8 286 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 ARFGEF3Q5TH69 2177 aa10.65□□□□□ -0.7
CDH3-202ENST00000429102 RIF1Q5UIP0 2472 aaKnown RBP10.65□□□□□ -0.7
CDH3-202ENST00000429102 CST2P09228 141 aa10.65□□□□□ -0.71
CDH3-202ENST00000429102 CD33P20138 364 aa10.65□□□□□ -0.71
CDH3-202ENST00000429102 GNPNAT1Q96EK6 184 aaPredicted RBP10.65□□□□□ -0.71
CDH3-202ENST00000429102 ATP5SQ99766 215 aa10.65□□□□□ -0.71
CDH3-202ENST00000429102 ARV1Q9H2C2 271 aa10.65□□□□□ -0.71
CDH3-202ENST00000429102 MSL2Q9HCI7 577 aa10.65□□□□□ -0.71
CDH3-202ENST00000429102 SIT1Q9Y3P8 196 aa10.65□□□□□ -0.71
CDH3-202ENST00000429102 PKDREJQ9NTG1 2253 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 ATG2AQ2TAZ0 1938 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 ZNF716A6NP11 495 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 IFNA10P01566 189 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 F2RP25116 425 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 CYB561P49447 251 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 EIF3IQ13347 325 aaKnown RBP10.64□□□□□ -0.71
CDH3-202ENST00000429102 ZNF66Q6ZN08 573 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 C1orf87Q8N0U7 546 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 IMMP1LQ96LU5 166 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 SIGLEC12Q96PQ1 595 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 OR4C12Q96R67 309 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 MAP1LC3B2A6NCE7 125 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 GJE1A6NN92 205 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 G6PCP35575 357 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 CEACAM6P40199 344 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 PAX9P55771 341 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 FAM3BP58499 235 aaPredicted RBP10.64□□□□□ -0.71
CDH3-202ENST00000429102 TAS2R30P59541 319 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 OR10V1Q8NGI7 309 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 MAP1LC3BQ9GZQ8 125 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 DEFB127Q9H1M4 99 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 IGLV3-32A0A0A0MS00 114 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 LY6G6EA0A0G2JKS1 128 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 PGPEP1LA6NFU8 196 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 CDIPTO14735 213 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 MAGEA5P43359 124 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 CASP6P55212 293 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 GGNQ86UU5 652 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 SPEM1Q8N4L4 309 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 SAP25Q8TEE9 199 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 DUSP23Q9BVJ7 150 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 U3KQA8 63 aa10.64□□□□□ -0.71
CDH3-202ENST00000429102 A0A1B0GUS0 222 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 OR5H1A6NKK0 313 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 PCBD1P61457 104 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 PLP2Q04941 152 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 BAXQ07812 192 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 Q0VFX4 171 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 GCNT2Q8N0V5 402 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 MGAQ8IWI9 3026 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 SMG1Q96Q15 3661 aaKnown RBP10.63□□□□□ -0.71
CDH3-202ENST00000429102 CLEC18AA5D8T8 446 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 ETV2O00321 342 aaPredicted RBP10.63□□□□□ -0.71
CDH3-202ENST00000429102 SYNGR2O43760 224 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 ZNF737O75373 536 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 CLEC18CQ8NCF0 446 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 DNASE2BQ8WZ79 361 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 RCC1LQ96I51 464 aaKnown RBP10.63□□□□□ -0.71
CDH3-202ENST00000429102 PCGF1Q9BSM1 259 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 ANKRD30BLA7E2S9 258 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 APLNRP35414 380 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 GLIPR1P48060 266 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 DAZAP2Q15038 168 aaPredicted RBP10.63□□□□□ -0.71
CDH3-202ENST00000429102 EXT1Q16394 746 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 ZNF826PQ6ZT77 177 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 OR5B12Q96R08 314 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 OPA3Q9H6K4 179 aa10.63□□□□□ -0.71
CDH3-202ENST00000429102 CLDN34H7C241 214 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 ALKBH6Q3KRA9 238 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 TRIM61Q5EBN2 209 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 TMEM105Q8N8V8 129 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 OR2Y1Q8NGV0 311 aa10.62□□□□□ -0.71
CDH3-202ENST00000429102 ZDHHC16Q969W1 377 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms