RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 NEIL1Q96FI4 390 aaPredicted RBP9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 SIGLEC12Q96PQ1 595 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 OR4C12Q96R67 309 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 WNT5BQ9H1J7 359 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 MANBALQ9NQG1 85 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 PCDH15Q96QU1 1955 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 A0A0U1RQK1 487 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 ZNF320A2RRD8 509 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 M0R143 59 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 LMO1P25800 156 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 GDF1P27539 372 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 SRD5A2P31213 254 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 TLE1Q04724 770 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 TGIF2LXQ8IUE1 241 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 TAF15Q92804 592 aaKnown RBP eCLIP9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 C2orf88Q9BSF0 95 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 PCGF1Q9BSM1 259 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 CTXND1A0A1B0GTU2 59 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 HOXA6P31267 233 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 PMP22Q01453 160 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 CATR1Q13166 79 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 ATP6V1FQ16864 119 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 MAJINQ3KP22 176 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 ZNF705AQ6ZN79 300 aaPredicted RBP9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 SAXO1Q8IYX7 474 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 GPR35Q9HC97 309 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 TMEM9BQ9NQ34 198 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 CBY1Q9Y3M2 126 aa9.23□□□□□ -0.93
ATP2C1-204ENST00000428331 AMBPP02760 352 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 IZUMO4Q1ZYL8 232 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 RIPPLY2Q5TAB7 128 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 ZIC4Q8N9L1 334 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 OR10G9Q8NGN4 311 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 OR10G7Q8NGN6 311 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 RNF138Q8WVD3 245 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 LSM10Q969L4 123 aaKnown RBP9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 CCDC74BQ96LY2 380 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 CYC1P08574 325 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 FOLR3P41439 243 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 CCL7P80098 99 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 SRSF7Q16629 238 aaKnown RBP eCLIP9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 LRRC75BQ2VPJ9 315 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 ZNF784Q8NCA9 323 aaPredicted RBP9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 DCAF16Q9NXF7 216 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 TP53TG5Q9Y2B4 290 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 MDFIC2A0A1B0GVS7 189 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 SRFP11831 508 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 PPP1CBP62140 327 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 SRYQ05066 204 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 GUSBP11Q6P575 273 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 Q6ZS49 121 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 FAM58AQ8N1B3 248 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 ZNF525Q8N782 197 aa9.22□□□□□ -0.93
ATP2C1-204ENST00000428331 A0A096LPE4 126 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 A0A1W2PPZ6 126 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 ZIC3O60481 467 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 APLNRP35414 380 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 MOB1BQ7L9L4 216 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 OR10D3Q8NH80 312 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 MISP3Q96FF7 219 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 SRXN1Q9BYN0 137 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 WDR61Q9GZS3 305 aaKnown RBP9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 FKBP11Q9NYL4 201 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 GNG3P63215 75 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 PAX5Q02548 391 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 FFAR4Q5NUL3 377 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 CISD2Q8N5K1 135 aaKnown RBP9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 TMEM147Q9BVK8 224 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 ADAMTS9Q9P2N4 1935 aa9.21□□□□□ -0.93
ATP2C1-204ENST00000428331 MKRN2OSH3BPM6 223 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 CELA2AP08217 269 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 CHRNA7P36544 502 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 ARF1P84077 181 aaKnown RBP9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 CEACAM21Q3KPI0 293 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 OR5A2Q8NGI9 324 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 MS4A10Q96PG2 267 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 PRDM14Q9GZV8 571 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 TAAR3PQ9P1P4 343 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 WNT16Q9UBV4 365 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 NAPSAO96009 420 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 GYPAP02724 150 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 MMP7P09237 267 aaPredicted RBP9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 CNN1P51911 297 aaKnown RBP9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 LINC00596Q86U02 117 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 BEND2Q8NDZ0 799 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 CIB3Q96Q77 187 aaPredicted RBP9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 PARLQ9H300 379 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 SMOC1Q9H4F8 434 aa9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 PATZ1Q9HBE1 687 aaKnown RBP9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 LAMA2P24043 3122 aaKnown RBP9.21□□□□□ -0.94
ATP2C1-204ENST00000428331 GZMBP10144 247 aa9.2□□□□□ -0.94
ATP2C1-204ENST00000428331 SRP14P37108 136 aaKnown RBP9.2□□□□□ -0.94
ATP2C1-204ENST00000428331 COTL1Q14019 142 aa9.2□□□□□ -0.94
ATP2C1-204ENST00000428331 ACSF3Q4G176 576 aaPredicted RBP9.2□□□□□ -0.94
ATP2C1-204ENST00000428331 SMRP1Q8NCR6 262 aa9.2□□□□□ -0.94
ATP2C1-204ENST00000428331 OR1K1Q8NGR3 316 aa9.2□□□□□ -0.94
ATP2C1-204ENST00000428331 FAM78BQ5VT40 261 aa9.2□□□□□ -0.94
ATP2C1-204ENST00000428331 AGBL5Q8NDL9 886 aa9.2□□□□□ -0.94
ATP2C1-204ENST00000428331 RNASEH2CQ8TDP1 164 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms