RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CNOT4O95628 575 aaKnown RBP13.4□□□□□ -0.26
CDH1-202ENST00000422392 IFNA17P01571 189 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 HOXB1P14653 301 aaPredicted RBP13.4□□□□□ -0.26
CDH1-202ENST00000422392 GNG3P63215 75 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 ZNF506Q5JVG8 444 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 LCN15Q6UWW0 184 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 OR10V1Q8NGI7 309 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 CDX2Q99626 313 aaPredicted RBP13.4□□□□□ -0.26
CDH1-202ENST00000422392 PRO3102Q9H379 93 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 ZNF665Q9H7R5 613 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 RPRMQ9NS64 109 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 MIOXQ9UGB7 285 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 RBM7Q9Y580 266 aaKnown RBP13.4□□□□□ -0.26
CDH1-202ENST00000422392 A0A1W2PNU3 283 aaPredicted RBP13.4□□□□□ -0.26
CDH1-202ENST00000422392 DEGS1O15121 323 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 MT-CO3P00414 261 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 COX5BP10606 129 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 MMP9P14780 707 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 HOXA4Q00056 320 aaPredicted RBP13.4□□□□□ -0.26
CDH1-202ENST00000422392 ZNF573Q86YE8 665 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 IL22RA2Q969J5 263 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 KCNS2Q9ULS6 477 aa13.4□□□□□ -0.26
CDH1-202ENST00000422392 WDR1O75083 606 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 IFNA5P01569 189 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 IGKV1-5P01602 117 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 HSPB1P04792 205 aaKnown RBP13.39□□□□□ -0.27
CDH1-202ENST00000422392 CEACAM1P13688 526 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 ACP1P24666 158 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 MAS1LP35410 378 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 APLNRP35414 380 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 ARR3P36575 388 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 EIF2S3P41091 472 aaKnown RBP13.39□□□□□ -0.27
CDH1-202ENST00000422392 ZNF674Q2M3X9 581 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 NIPSNAP3BQ9BS92 247 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 UNKLQ9H9P5 680 aaKnown RBP13.39□□□□□ -0.27
CDH1-202ENST00000422392 RD3LP0DJH9 198 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 S100GP29377 79 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 RAB11AP62491 216 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 TLE1Q04724 770 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 CLN3Q13286 438 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 TESK1Q15569 626 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 ZNF726P1Q15940 193 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 WDR86Q86TI4 376 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 HAPLN4Q86UW8 402 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 TCTEX1D2Q8WW35 142 aa13.39□□□□□ -0.27
CDH1-202ENST00000422392 RIMS4Q9H426 269 aaPredicted RBP13.39□□□□□ -0.27
CDH1-202ENST00000422392 A0A1B0GU03 582 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 IL18BPO95998 194 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 CELA3BP08861 270 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 NDUFA6P56556 154 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 ERVS71-1P61550 626 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 FAM53AQ6NSI3 398 aaPredicted RBP13.38□□□□□ -0.27
CDH1-202ENST00000422392 Q6P435 159 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 ZNF880Q6PDB4 577 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 MCEMP1Q8IX19 187 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 TVP23CQ96ET8 276 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 OR51I2Q9H344 312 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 PLK3Q9H4B4 646 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 TRAV20A0A0B4J274 112 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 IFITM10A6NMD0 228 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 SYNGR2O43760 224 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 RNPS1Q15287 305 aaKnown RBP13.38□□□□□ -0.27
CDH1-202ENST00000422392 MDP1Q86V88 176 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 C1QL4Q86Z23 238 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 RBMXL1Q96E39 390 aaKnown RBP13.38□□□□□ -0.27
CDH1-202ENST00000422392 PSENENQ9NZ42 101 aa13.38□□□□□ -0.27
CDH1-202ENST00000422392 TRBV23-1A0A0A0MS06 115 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 LOC102723971A0A1B0GUV8 181 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 CYB5BO43169 146 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 DFFBO76075 338 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 OR2H2O95918 312 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 OR8G1Q15617 311 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 ZNF585BQ52M93 769 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 DCAF10Q5QP82 559 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 SNIP1Q8TAD8 396 aaKnown RBP13.37□□□□□ -0.27
CDH1-202ENST00000422392 CABLES2Q9BTV7 478 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 TRAPPC2LQ9UL33 140 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 MPC1Q9Y5U8 109 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 LAMA5O15230 3695 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 TRBV6-6A0A0A6YYG2 114 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 OR5B21A6NL26 309 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 CEBPDP49716 269 aaPredicted RBP13.37□□□□□ -0.27
CDH1-202ENST00000422392 ALKBH6Q3KRA9 238 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 SPANXN5Q5MJ07 72 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 GTF3AQ92664 365 aaKnown RBP13.37□□□□□ -0.27
CDH1-202ENST00000422392 RAB40CQ96S21 281 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 DEFB127Q9H1M4 99 aa13.37□□□□□ -0.27
CDH1-202ENST00000422392 TMEM265A0A087WTH1 108 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 CD200P41217 278 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 ELLP55199 621 aaPredicted RBP13.36□□□□□ -0.27
CDH1-202ENST00000422392 KHDC3LQ587J8 217 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 OR2B11Q5JQS5 317 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 FAM90A2PQ658T7 463 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 ZNF787Q6DD87 383 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 SPNS3Q6ZMD2 512 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 LINC00596Q86U02 117 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 C1orf210Q8IVY1 113 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 SCGB1C1Q8TD33 95 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 EDARADDQ8WWZ3 215 aa13.36□□□□□ -0.27
CDH1-202ENST00000422392 TCEAL7Q9BRU2 100 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms