RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 SLC38A11Q08AI6 406 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 SURF2Q15527 256 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-206ENST00000421141 ZNF418Q8TF45 676 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-206ENST00000421141 PTX4Q96A99 478 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 ZNF488Q96MN9 340 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 SMLR1H3BR10 107 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 CTRB1P17538 263 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 CNN1P51911 297 aaKnown RBP9.24□□□□□ -0.93
PTCH1-206ENST00000421141 RNFT1Q5M7Z0 435 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 CTRB2Q6GPI1 263 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 C20orf204Q6ZNR8 217 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 GPA33Q99795 319 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 IGLV1-36A0A0B4J1U3 117 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 C9orf170A2RU37 121 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 CST7O76096 145 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 MT-ND4LP03901 98 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 MUC1P15941 1255 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-206ENST00000421141 ATP6V1FQ16864 119 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 ZNF787Q6DD87 383 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 IDI2-AS1Q9NZ38 188 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 FAM208BQ5VWN6 2430 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 DSCAMO60469 2012 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 ODAMA1E959 279 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 CHEK1O14757 476 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 SLC25A4P12235 298 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 MVDP53602 400 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 LCN2P80188 198 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 CTF1Q16619 201 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 ZNF331Q9NQX6 463 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-206ENST00000421141 RPUSD3Q6P087 351 aaKnown RBP9.24□□□□□ -0.93
PTCH1-206ENST00000421141 ZNF645Q8N7E2 425 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 TGFAP01135 160 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 OR13C7P0DN81 318 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 PPP1CCP36873 323 aaKnown RBP9.24□□□□□ -0.93
PTCH1-206ENST00000421141 FAM3AP98173 230 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 LCN15Q6UWW0 184 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 GAPTQ8N292 157 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 PRSS33Q8NF86 280 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 PGLYRP3Q96LB9 341 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 SRRQ9GZT4 340 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 AKR1C3P42330 323 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 RPL7L1Q6DKI1 246 aaKnown RBP9.24□□□□□ -0.93
PTCH1-206ENST00000421141 RBPMS2Q6ZRY4 209 aaKnown RBP9.24□□□□□ -0.93
PTCH1-206ENST00000421141 NTNG2Q96CW9 530 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 OR51B2Q9Y5P1 312 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 FREM1Q5H8C1 2179 aa9.24□□□□□ -0.93
PTCH1-206ENST00000421141 TRAV8-7A0A075B6U6 113 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 NDUFB6O95139 128 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM219AQ8IW50 185 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 OR52B4Q8NGK2 314 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 SCMH1Q96GD3 660 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 MEGF10Q96KG7 1140 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 KCNK15Q9H427 330 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 SIRT7Q9NRC8 400 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 SFT2D2O95562 160 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 ONECUT2O95948 504 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 H3F3AP84243 136 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 CXorf66Q5JRM2 361 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-206ENST00000421141 MRPL22Q9NWU5 206 aaKnown RBP9.23□□□□□ -0.93
PTCH1-206ENST00000421141 IGKV1D-42A0A075B6H8 117 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 LOXL3P58215 753 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 UNQ9370/PRO34162Q6UXP9 181 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 CALHM1Q8IU99 346 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 NUP37Q8NFH4 326 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 ZMIZ1Q9ULJ6 1067 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 NOTCH3Q9UM47 2321 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 LY6EQ16553 131 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 C1QTNF12Q5T7M4 302 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 XAF1Q6GPH4 301 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 PARP12Q9H0J9 701 aaKnown RBP9.23□□□□□ -0.93
PTCH1-206ENST00000421141 SLC45A2Q9UMX9 530 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 IGLV3-32A0A0A0MS00 114 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 CTSDP07339 412 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FSTP19883 344 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 LSM11P83369 360 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTCH1-206ENST00000421141 ABHD12Q8N2K0 398 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 RNF2Q99496 336 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 P2RX4Q99571 388 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 MRPS18AQ9NVS2 196 aaKnown RBP9.23□□□□□ -0.93
PTCH1-206ENST00000421141 NAGKQ9UJ70 344 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A10PA6NDY2 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A18PA6NE21 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A16PA6NEW6 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A20PA6NIJ5 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A8PA6NJQ4 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A7PA6NKC0 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A22PA8MWA6 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A12PA8MX19 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A5PA8MXJ8 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A23PA8MXZ1 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 C1QCP02747 245 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 CD1AP06126 327 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A15PP0C7V4 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A13PP0C7W8 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A14PP0C7W9 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 FAM90A24PP0C7X0 464 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 DHRS2Q13268 280 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 HAGHQ16775 308 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 ZNF66Q6ZN08 573 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 SSX7Q7RTT5 188 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms