RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SELLP14151 372 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 CAV2P51636 162 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 IL13RA2Q14627 380 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 CLINT1Q14677 625 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 ZNF146Q15072 292 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 P2RY6Q15077 328 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 Q6ZRM9 215 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 BEND4Q6ZU67 534 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 ZNF808Q8N4W9 903 aaPredicted RBP7.4□□□□□ -1.22
SNCA-206ENST00000420646 TMEM217Q8N7C4 229 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 CCDC71LQ8N9Z2 235 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 Q8NA96 180 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 BPIFCQ8NFQ6 507 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 DMBX1Q8NFW5 382 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 OR10V1Q8NGI7 309 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 SH3BGRL3Q9H299 93 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 WASF3Q9UPY6 502 aa7.4□□□□□ -1.22
SNCA-206ENST00000420646 DOCK11Q5JSL3 2073 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 SNAPC5O75971 98 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 CST7O76096 145 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 F12P00748 615 aaPredicted RBP7.4□□□□□ -1.23
SNCA-206ENST00000420646 GLAP06280 429 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 BTN1A1Q13410 526 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 SMCO1Q147U7 214 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 UTF1Q5T230 341 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 C1orf185Q5T7R7 199 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 H1FOOQ8IZA3 346 aaPredicted RBP7.4□□□□□ -1.23
SNCA-206ENST00000420646 LRRC29Q8WV35 223 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 COQ2Q96H96 371 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 TAAR3PQ9P1P4 343 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 FAM96BQ9Y3D0 163 aa7.4□□□□□ -1.23
SNCA-206ENST00000420646 A0A1B0GW55 424 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 C12orf77C9JDV5 145 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 MKRN2OSH3BPM6 223 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 DUX4L2P0CJ85 424 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 DUX4L3P0CJ86 424 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 DUX4L4P0CJ87 422 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 DUX4L5P0CJ88 424 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 DUX4L6P0CJ89 424 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 DUX4L7P0CJ90 424 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 PET100P0DJ07 73 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 COL10A1Q03692 680 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 FAM122CQ6P4D5 195 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 DUX4L9Q6RFH8 374 aaPredicted RBP7.39□□□□□ -1.23
SNCA-206ENST00000420646 BTNL3Q6UXE8 466 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 Q6ZS49 121 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 DOLPP1Q86YN1 238 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 CMTM1Q8IZ96 169 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 CD177Q8N6Q3 437 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 HSD17B11Q8NBQ5 300 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 ZNRF1Q8ND25 227 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 C1orf162Q8NEQ5 155 aaPredicted RBP7.39□□□□□ -1.23
SNCA-206ENST00000420646 DCAF16Q9NXF7 216 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 DUX4Q9UBX2 424 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 LRRK2Q5S007 2527 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 ST8SIA3O43173 380 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 CDS2O95674 445 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 F2RP25116 425 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 PPP1CCP36873 323 aaKnown RBP7.39□□□□□ -1.23
SNCA-206ENST00000420646 LPAR6P43657 344 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 ZNF880Q6PDB4 577 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 FAM180AQ6UWF9 173 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 ACP7Q6ZNF0 438 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 LRTM2Q8N967 370 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 DEFB108BQ8NET1 73 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 OR4A4PQ8NGN8 299 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 BCL2L14Q9BZR8 327 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 VPS13CQ709C8 3753 aa7.39□□□□□ -1.23
SNCA-206ENST00000420646 TUBAL3A6NHL2 446 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.38□□□□□ -1.23
SNCA-206ENST00000420646 IGKV1-39P01597 117 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 IGKV1D-39P04432 117 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 MOGAT3Q86VF5 341 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 OR4D5Q8NGN0 318 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 OR13A1Q8NGR1 328 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 STOML3Q8TAV4 291 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 OR2V2Q96R30 315 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 CXXC4Q9H2H0 198 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 HRNRQ86YZ3 2850 aaPredicted RBP7.38□□□□□ -1.23
SNCA-206ENST00000420646 A0A0G2JNJ9 132 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 RAMP3O60896 148 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 MED6O75586 246 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 CRYAAP02489 173 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 CCKARP32238 428 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 DEFA5Q01523 94 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 HNF4GQ14541 408 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 MST1LQ2TV78 715 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 LINC00596Q86U02 117 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 SNRNP40Q96DI7 357 aaKnown RBP7.38□□□□□ -1.23
SNCA-206ENST00000420646 MUCL1Q96DR8 90 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 C5orf30Q96GV9 206 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 ABHD14BQ96IU4 210 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 DNAJB11Q9UBS4 358 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 Q9UFV3 132 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 A8MXE2 369 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 J3QW42 95 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 CHST1O43916 411 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 SERPINE2P07093 398 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 ZP3P21754 424 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 NKX2-1P43699 371 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms