RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SLC25A22Q9H936 323 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 B3GAT1Q9P2W7 334 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 TMEM131Q92545 1883 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 LMO7DNF2Z398 122 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 TSPAN2O60636 221 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 TNFSF13O75888 250 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 IL3RAP26951 378 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 RBX1P62877 108 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 SRPXP78539 464 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 KCNIP4Q6PIL6 250 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 ZNF709Q8N972 641 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 ZNF721Q8TF20 911 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 SIGLEC12Q96PQ1 595 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 TMEM106BQ9NUM4 274 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 CACNA1HO95180 2353 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 CEP192Q8TEP8 1941 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 EGR1P18146 543 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 DTYMKP23919 212 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 PAX9P55771 341 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 CFHR1Q03591 330 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 NSDHLQ15738 373 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 MAFAQ8NHW3 353 aaPredicted RBP12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 RASL10BQ96S79 203 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 GPR35Q9HC97 309 aa12.63□□□□□ -0.39
NCKIPSD-204ENST00000416649 OR7C1O76099 320 aaPredicted RBP12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 GUCA1AP43080 201 aaPredicted RBP12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 FASLGP48023 281 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 ID3Q02535 119 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 Q6ZWC4 215 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 PNRC2Q9NPJ4 139 aaKnown RBP12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 TMEM9BQ9NQ34 198 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 VSTM2BA6NLU5 285 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 CFIP05156 583 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 CCL1P22362 96 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 CEACAM8P31997 349 aaPredicted RBP12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 PSMB3P49720 205 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 ZP4Q12836 540 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 ZNF818PQ6ZRF7 136 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 OR1L6Q8NGR2 347 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 SLC35E1Q96K37 410 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 FAM103A1Q9BTL3 118 aaKnown RBP12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 COPS7AQ9UBW8 275 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 ST3GAL6Q9Y274 331 aa12.62□□□□□ -0.39
NCKIPSD-204ENST00000416649 H3BMH7 237 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 K7ESF4 209 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 HSPB6O14558 160 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 VDAC1P21796 283 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 EFNA3P52797 238 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 LEMD1Q68G75 181 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 OR1N1Q8NGS0 311 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 OR51H1Q8NH63 302 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 PP6455Q8WZ26 134 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 DDIT4LQ96D03 193 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 SAMD10Q9BYL1 202 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 RNF150Q9ULK6 438 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 LNP1A1A4G5 178 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 PATE3B3GLJ2 98 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 C10orf142B7Z368 130 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 CCL25O15444 150 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 OR1K1Q8NGR3 316 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 CCDC74BQ96LY2 380 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 RBM24Q9BX46 236 aaKnown RBP12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 MRPL13Q9BYD1 178 aaKnown RBP12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 TECTAO75443 2155 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 GDF9O60383 454 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 IGKV3-11P04433 115 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 HNF1AP20823 631 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 GRB2P62993 217 aaKnown RBP12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 MBD3L1Q8WWY6 194 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 IMMP2LQ96T52 175 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 C20orf144Q9BQM9 153 aa12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 RYDENQ9NUL5 291 aaKnown RBP12.61□□□□□ -0.39
NCKIPSD-204ENST00000416649 A0A0G2JRQ6 117 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 UBE2L5PA0A1B0GUS4 154 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 A0A1W2PQD3 144 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 LIPT2A6NK58 231 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 S100A7P31151 101 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 ARL16Q0P5N6 197 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 CADM4Q8NFZ8 388 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 CCL28Q9NRJ3 127 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 CBY3A6NI87 242 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 C1QTNF9BB2RNN3 333 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 OR5G3P0C626 314 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 KRTDAPP60985 99 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 PPP1CBP62140 327 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 PMP22Q01453 160 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 MALLQ13021 153 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 TPTE2P1Q5T6R2 138 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 RALGAPA1Q6GYQ0 2036 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 OR8G2PQ6IF36 304 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 STPG4Q8N801 248 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 BORCS8Q96FH0 119 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 TXN2Q99757 166 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 ZDHHC11Q9H8X9 412 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 TAAR3PQ9P1P4 343 aa12.6□□□□□ -0.39
NCKIPSD-204ENST00000416649 IGHV1OR21-1A0A087WYE8 117 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 ANKUB1A6NFN9 424 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 ADMP35318 185 aa12.59□□□□□ -0.39
NCKIPSD-204ENST00000416649 TPPP2P59282 170 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms