RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SLC25A35Q3KQZ1 300 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 GCSAMLQ5JQS6 135 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 ZFP1Q6P2D0 407 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 SSX6Q7RTT6 188 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 P2RY8Q86VZ1 359 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 DHFR2Q86XF0 187 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 GPR32P1Q8NGA4 272 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR10AD1Q8NGE0 317 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR6K6Q8NGW6 343 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR8U1Q8NH10 309 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 RNF133Q8WVZ7 376 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 CPNE4Q96A23 557 aaPredicted RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 RMND5BQ96G75 393 aaPredicted RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 TEX37Q96LM6 180 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR2M4Q96R27 311 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR4K3Q96R72 315 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR52E6Q96RD3 313 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 KCTD14Q9BQ13 255 aaPredicted RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 PCBD2Q9H0N5 130 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 Q9H3A6 140 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 HRASLSQ9HDD0 168 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 VPS29Q9UBQ0 182 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 ZNF282Q9UDV7 671 aaPredicted RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 SLC23A2Q9UGH3 650 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 NUP214P35658 2090 aaPredicted RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 UTP20O75691 2785 aaKnown RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 EML6Q6ZMW3 1958 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 GNG14A0A1W2PPG7 69 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 PRORSD1PA6NEY8 169 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 ZNF726A6NNF4 738 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 C11orf94C9JXX5 98 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 HCRTR1O43613 425 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 FOXH1O75593 365 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 IGHG1P01857 330 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR4E1P0C645 316 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR5H8P0DN80 308 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 CTSEP14091 401 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 GLP1RP43220 463 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 IDH2P48735 452 aaKnown RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 OR7A5Q15622 319 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 PYCR3Q53H96 274 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 SPIN4Q56A73 249 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 RUSC1-AS1Q66K80 236 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 TMEM42Q69YG0 159 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 NOXRED1Q6NXP6 359 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 ZNF343Q6P1L6 599 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 KRTCAP2Q8N6L1 136 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 PGLYRP3Q96LB9 341 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 SCN2AQ99250 2005 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 P2RX4Q99571 388 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 AIF1LQ9BQI0 150 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 TAPBPLQ9BX59 468 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 EBPLQ9BY08 206 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 ZNF442Q9H7R0 627 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 MYOZ1Q9NP98 299 aaPredicted RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 EXOSC4Q9NPD3 245 aaKnown RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 ZNF629Q9UEG4 869 aaPredicted RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 TAC3Q9UHF0 121 aa1.93□□□□□ -2.1
MCF2-204ENST00000414978 PCYT1BQ9Y5K3 369 aaPredicted RBP1.93□□□□□ -2.1
MCF2-204ENST00000414978 FREM2Q5SZK8 3169 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 ARGFXA6NJG6 315 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 KRTAP29-1A8MX34 341 aaPredicted RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 FXYD1O00168 92 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 NBEAP1P0C6P0 100 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 NELFEP18615 380 aaKnown RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 USF1P22415 310 aaPredicted RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 SERPINB1P30740 379 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 TAS2R19P59542 299 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 KIAA0040Q15053 153 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 NSDHLQ15738 373 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 C4orf26Q17RF5 130 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 KRTAP24-1Q3LI83 254 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 NANOGP8Q6NSW7 305 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 ZNF329Q86UD4 541 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 RNF175Q8N4F7 328 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 TBC1D19Q8N5T2 526 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 OR51D1Q8NGF3 324 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 DNAJC9Q8WXX5 260 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 PTH2Q96A98 100 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 TESCQ96BS2 214 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 CGREF1Q99674 301 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 ARV1Q9H2C2 271 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 VCXQ9H320 206 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 METTL8Q9H825 291 aaKnown RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 SLC25A22Q9H936 323 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 NANOGQ9H9S0 305 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 GNB4Q9HAV0 340 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 AMBNQ9NP70 447 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 PLEKHJ1Q9NW61 149 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 TMEM9Q9P0T7 183 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 MOKQ9UQ07 419 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 AP3M1Q9Y2T2 418 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 ORC6Q9Y5N6 252 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 LAMA1P25391 3075 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 DYSFO75923 2080 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 NSD1Q96L73 2696 aaPredicted RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 SPTBN1Q01082 2364 aaKnown RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 A0A096LPI6 279 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 FAM240AA0A1B0GVK7 77 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 FUOMA2VDF0 154 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms