RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 F8W036 122 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 HSPA12AO43301 675 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 HEXAP06865 529 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 EGR1P18146 543 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 BMP5P22003 454 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 OR3A1P47881 315 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 POLR2GP62487 172 aaKnown RBP eCLIP12.91□□□□□ -0.34
LRCH3-202ENST00000414675 BLOC1S1P78537 153 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 IL34Q6ZMJ4 242 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 SVBPQ8N300 66 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 CISD2Q8N5K1 135 aaKnown RBP12.91□□□□□ -0.34
LRCH3-202ENST00000414675 LRRC29Q8WV35 223 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 TMEM30CPA0ZSE6 113 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 FAM74A7A6NL05 159 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 C12orf77C9JDV5 145 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 TRIM77I1YAP6 450 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 GPR137BO60478 399 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 MED6O75586 246 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 PSG2P11465 335 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 CEACAM6P40199 344 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 P2RY1P47900 373 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 NKX6-1P78426 367 aaPredicted RBP12.91□□□□□ -0.34
LRCH3-202ENST00000414675 NHLH2Q02577 135 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 FAM74A3Q4VXF1 159 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 VHLLQ6RSH7 139 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 DOLPP1Q86YN1 238 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 SAT2Q96F10 170 aaPredicted RBP12.91□□□□□ -0.34
LRCH3-202ENST00000414675 MAGT1Q9H0U3 335 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 PPP1R3CQ9UQK1 317 aa12.91□□□□□ -0.34
LRCH3-202ENST00000414675 USF3Q68DE3 2245 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 A8MXE2 369 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 FBXO24O75426 580 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 GAPDHP04406 335 aaKnown RBP12.9□□□□□ -0.34
LRCH3-202ENST00000414675 OR8U9P0C7N5 309 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 VDAC1P21796 283 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 COL10A1Q03692 680 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 PJVKQ0ZLH3 352 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 C1orf174Q8IYL3 243 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 CD177Q8N6Q3 437 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 TPRX1Q8N7U7 411 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 OR8U1Q8NH10 309 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 PRR7Q8TB68 274 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 MUCL1Q96DR8 90 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 TMEM231Q9H6L2 316 aa12.9□□□□□ -0.34
LRCH3-202ENST00000414675 TLN1Q9Y490 2541 aaKnown RBP12.9□□□□□ -0.34
LRCH3-202ENST00000414675 MEX3AA1L020 520 aaKnown RBP12.9□□□□□ -0.35
LRCH3-202ENST00000414675 CLEC18AA5D8T8 446 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 ATP6V1G2-DDX39BF2Z307 99 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 TOR1AO14656 332 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 JTBO76095 146 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 NXPH3O95157 252 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 IGKV1-39P01597 117 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 CRYAAP02489 173 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 IGKV1D-39P04432 117 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 CCKARP32238 428 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 NKX2-1P43699 371 aaPredicted RBP12.9□□□□□ -0.35
LRCH3-202ENST00000414675 SRSF3P84103 164 aaKnown RBP12.9□□□□□ -0.35
LRCH3-202ENST00000414675 SLC35E4Q6ICL7 350 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 CLEC18CQ8NCF0 446 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 ESRP2Q9H6T0 727 aaKnown RBP12.9□□□□□ -0.35
LRCH3-202ENST00000414675 ZFP57Q9NU63 452 aa12.9□□□□□ -0.35
LRCH3-202ENST00000414675 DUXBA0A1W2PPF3 345 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 IGHV3-13P01766 116 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 TBR1Q16650 682 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 IZUMO4Q1ZYL8 232 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 SMIM21Q3B7S5 101 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 GPR157Q5UAW9 335 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 FAM122CQ6P4D5 195 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 TMEM171Q8WVE6 324 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 IL22RA2Q969J5 263 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 SPIN2AQ99865 258 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 SPIN2BQ9BPZ2 258 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 KCNS2Q9ULS6 477 aa12.89□□□□□ -0.35
LRCH3-202ENST00000414675 A0A0G2JNJ9 132 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 FAM24AA6NFZ4 105 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 ADCYAP1P18509 176 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 GLRXP35754 106 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 CD200P41217 278 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 GLIPR1P48060 266 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 ASCL1P50553 236 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 GNMTQ14749 295 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 GUCA2BQ16661 112 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 PUSL1Q8N0Z8 303 aaKnown RBP12.88□□□□□ -0.35
LRCH3-202ENST00000414675 CLRN3Q8NCR9 226 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 OR52L2PQ8NGH6 319 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 MRGPRDQ8TDS7 321 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 SMIM8Q96KF7 97 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 Q9UFV3 132 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 RBM7Q9Y580 266 aaKnown RBP12.88□□□□□ -0.35
LRCH3-202ENST00000414675 IGSF23A1L1A6 192 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 SSSCA1O60232 199 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 TMEM50AO95807 157 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 HBZP02008 142 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 LPAR6P43657 344 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 PRR30Q53SZ7 412 aaPredicted RBP12.88□□□□□ -0.35
LRCH3-202ENST00000414675 DRAM1Q8N682 238 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 UBAC2Q8NBM4 344 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 GPR146Q96CH1 333 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 C5orf30Q96GV9 206 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 DCTN5Q9BTE1 182 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms