RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SDF2Q99470 211 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 TSC22D3Q99576 134 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CDX2Q99626 313 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 RNF5Q99942 180 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 SLIRPQ9GZT3 109 aaKnown RBP2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CHRNA10Q9GZZ6 450 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 CXorf21Q9HAI6 301 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 AHSPQ9NZD4 102 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 DNAJC27Q9NZQ0 273 aa2.03□□□□□ -2.08
HMGB1P11-201ENST00000413899 UNC13CQ8NB66 2214 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 FREM3P0C091 2139 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 IGLV1-36A0A0B4J1U3 117 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 A0A0B4J2E0 115 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 A0A1B0GX12 115 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 TLCD2A6NGC4 264 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 METTL15A6NJ78 407 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 CPSF4LA6NMK7 179 aaKnown RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF716A6NP11 495 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF99A8MXY4 864 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 J3QRE1 110 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 BHLHE40O14503 412 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 SOCS1O15524 211 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 AQP9O43315 295 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 CHST10O43529 356 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 MRPS14O60783 128 aaKnown RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 UGT2B11O75310 529 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ENTPD6O75354 484 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 CCNB2O95067 398 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 NSA2O95478 260 aaKnown RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 TNFP01375 233 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 APCSP02743 223 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 SERPINA5P05154 406 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 DCNP07585 359 aaKnown RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 GUSBP08236 651 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF735P0CB33 412 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 LIMS3P0CW19 117 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 LIMS4P0CW20 117 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 PIPP12273 146 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ANXA8P13928 327 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 CPN2P22792 545 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 GADD45AP24522 165 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 SSTR5P35346 364 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 OPRK1P41145 380 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 GPR4P46093 362 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 CX3CR1P49238 355 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 RND2P52198 227 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 TMBIM6P55061 237 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 VSX2P58304 361 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 SNRPGP62308 76 aaKnown RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 BTG2P78543 158 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF816Q0VGE8 651 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 SKP2Q13309 424 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ILKQ13418 452 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 QPRTQ15274 297 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF141Q15928 474 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 DEFB133Q30KQ1 61 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ARHGAP11BQ3KRB8 267 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ORMDL2Q53FV1 153 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 AVPI1Q5T686 147 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 AADACL4Q5VUY2 407 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ANGPTL8Q6UXH0 198 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 CALHM1Q8IU99 346 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 WDFY1Q8IWB7 410 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 SLC25A45Q8N413 288 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRIML2Q8N7C3 387 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 CLDN22Q8N7P3 220 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 LRRC75AQ8NAA5 344 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 NECAP1Q8NC96 275 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF555Q8NEP9 628 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 BPIFB6Q8NFQ5 453 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR52R1Q8NGF1 315 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR52P1PQ8NH57 321 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 AKR7LQ8NHP1 331 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 PFN4Q8NHR9 129 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 TSLPQ969D9 159 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 RASD2Q96D21 266 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRNT1Q96Q11 434 aaKnown RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 STACQ99469 402 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 BCL7BQ9BQE9 202 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 DCUN1D5Q9BTE7 237 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 CDCA4Q9BXL8 241 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 UCK2Q9BZX2 261 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 NXF2Q9GZY0 626 aaKnown RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 PIGUQ9H490 435 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 CCNB1IP1Q9NPC3 277 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 HRASLS2Q9NWW9 162 aa2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 YARS2Q9Y2Z4 477 aaKnown RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 SPTBN5Q9NRC6 3674 aaKnown RBP2.02□□□□□ -2.09
HMGB1P11-201ENST00000413899 GOLGA4Q13439 2230 aaKnown RBP2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 ASCC3Q8N3C0 2202 aaKnown RBP2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 IGLV3-12A0A075B6K2 115 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 A0A1B0GTQ1 180 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 A0A1B0GWA3 101 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR5K4A6NMS3 321 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 C5orf58C9J3I9 102 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 J3QRK9 145 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 GNGT2O14610 69 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 NUPL2O15504 423 aaKnown RBP2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 RRP8O43159 456 aaKnown RBP2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 CCNKO75909 580 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms