RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 LILRB1Q8NHL6 650 aaPredicted RBP14.94□□□□□ -0.02
PHRF1-202ENST00000413872 GOLT1BQ9Y3E0 138 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 RALGAPA2Q2PPJ7 1873 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 IGLV3-12A0A075B6K2 115 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 MRPL14Q6P1L8 145 aaKnown RBP14.94□□□□□ -0.02
PHRF1-202ENST00000413872 OR8I2Q8N0Y5 310 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 LOC390937A0A1W2PQ73 354 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 TDRD6O60522 2096 aaKnown RBP14.93□□□□□ -0.02
PHRF1-202ENST00000413872 RECKO95980 971 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 G6PCP35575 357 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 MRPS18CQ9Y3D5 142 aaKnown RBP14.93□□□□□ -0.02
PHRF1-202ENST00000413872 SLC35B1P78383 322 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 CALHM1Q8IU99 346 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 C1orf162Q8NEQ5 155 aaPredicted RBP14.93□□□□□ -0.02
PHRF1-202ENST00000413872 FAM206AQ9NX38 181 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 PITPNC1Q9UKF7 332 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 ZNF716A6NP11 495 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 FDX2Q6P4F2 183 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 IMMP1LQ96LU5 166 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 NEURL2Q9BR09 285 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 LPAR5Q9H1C0 372 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 WNT5BQ9H1J7 359 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 HSF4Q9ULV5 492 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 HSBP1O75506 76 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 AMELYQ99218 206 aa14.93□□□□□ -0.02
PHRF1-202ENST00000413872 NXF2Q9GZY0 626 aaKnown RBP14.93□□□□□ -0.02
PHRF1-202ENST00000413872 CORTO00230 105 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 DLL1O00548 723 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 PSG2P11465 335 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 RPL27AP46776 148 aaKnown RBP14.92□□□□□ -0.02
PHRF1-202ENST00000413872 OR51B2Q9Y5P1 312 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 NKX2-6A6NCS4 301 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 PDLIM4P50479 330 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 NRN1LQ496H8 165 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 TEPPQ6URK8 271 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 TMEM50BP56557 158 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 MYOFQ9NZM1 2061 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 TRBV5-7A0A0A0MS05 114 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 EFEMP2O95967 443 aa14.92□□□□□ -0.02
PHRF1-202ENST00000413872 ZNF705AQ6ZN79 300 aaPredicted RBP14.92□□□□□ -0.02
PHRF1-202ENST00000413872 PNRC1Q12796 327 aaPredicted RBP14.91□□□□□ -0.02
PHRF1-202ENST00000413872 ECSCRQ19T08 205 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 FAM78BQ5VT40 261 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 C19orf48Q6RUI8 117 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 LYZL2Q7Z4W2 148 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 RFLNBQ8N5W9 214 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 DYNLRB2Q8TF09 96 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 DYRK2Q92630 601 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 LTBP1Q14766 1721 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 ODAMA1E959 279 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 TNFSF10P50591 281 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 ANKRD55Q3KP44 614 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 MMD2Q8IY49 270 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 SLC24A4Q8NFF2 622 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 OPN4Q9UHM6 478 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 WASHC3Q9Y3C0 194 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 LEUTXA8MZ59 168 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 PTGDSP41222 190 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 ATP5J2P56134 94 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 C10orf113Q5VZT2 155 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 KLK13Q9UKR3 277 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 GLRXP35754 106 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 GFRA1P56159 465 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 SPCS3P61009 180 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 C19orf57Q0VDD7 668 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 WDR31Q8NA23 367 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 OR4X1Q8NH49 305 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 SIGLEC12Q96PQ1 595 aa14.91□□□□□ -0.02
PHRF1-202ENST00000413872 HDHD3Q9BSH5 251 aaPredicted RBP14.91□□□□□ -0.02
PHRF1-202ENST00000413872 H0Y980 276 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 MMP9P14780 707 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 FBLIM1Q8WUP2 373 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 COMPP49747 757 aaPredicted RBP14.9□□□□□ -0.02
PHRF1-202ENST00000413872 EWSR1Q01844 656 aaKnown RBP eCLIP14.9□□□□□ -0.023e-6■■□□□ 11.8
PHRF1-202ENST00000413872 COX19Q49B96 90 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 DHRS7BQ6IAN0 325 aaPredicted RBP14.9□□□□□ -0.02
PHRF1-202ENST00000413872 NOL4LQ96MY1 436 aaPredicted RBP14.9□□□□□ -0.02
PHRF1-202ENST00000413872 NPAS1Q99742 590 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 IDI2-AS1Q9NZ38 188 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 PSME4Q14997 1843 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 TRBV23-1A0A0A0MS06 115 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 NPIPB9F8W1W9 429 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 BVESQ8NE79 360 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 FAM57AQ8TBR7 257 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 ZP3P21754 424 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 ID1P41134 155 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 ZNF154Q13106 437 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 WFDC6Q9BQY6 131 aa14.9□□□□□ -0.02
PHRF1-202ENST00000413872 LOC102723996A0A087X1L8 192 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 F5H697 171 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 RGS13O14921 159 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 HIST1H1EP10412 219 aaKnown RBP14.89□□□□□ -0.03
PHRF1-202ENST00000413872 B2MP61769 119 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 MUC15Q8N387 334 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 WDR73Q6P4I2 378 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 C2CD4CQ8TF44 421 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 TMPRSS5Q9H3S3 457 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 KCNK7Q9Y2U2 307 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 HPXP02790 462 aa14.89□□□□□ -0.03
PHRF1-202ENST00000413872 APOBEC3AP31941 199 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms