RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 NQO2P16083 231 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 COMPP49747 757 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-211ENST00000413186 ZNF266Q14584 549 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 HMGN3Q15651 99 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 PGLYRP3Q96LB9 341 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 DLL4Q9NR61 685 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 PRF1P14222 555 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 WT1P19544 449 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-211ENST00000413186 KLK2P20151 261 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 PSMB6P28072 239 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 APOBEC3AP31941 199 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-211ENST00000413186 IL13RA2Q14627 380 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 SURF2Q15527 256 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-211ENST00000413186 IAH1Q2TAA2 248 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-211ENST00000413186 ARHGAP5-AS1Q96IT6 56 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 FAAP24Q9BTP7 215 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 SLC25A32Q9H2D1 315 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 ZNF665Q9H7R5 613 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 EDA2RQ9HAV5 297 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 MYO7BQ6PIF6 2116 aa7.35□□□□□ -1.23
SYNE1-211ENST00000413186 TRBV5-7A0A0A0MS05 114 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 C3orf80F5H4A9 247 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 FPR2P25090 351 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 FAM3AP98173 230 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 ZNF816Q0VGE8 651 aaPredicted RBP7.34□□□□□ -1.23
SYNE1-211ENST00000413186 OR8B3Q8NGG8 313 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 RNF138Q8WVD3 245 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 UPRTQ96BW1 309 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 STARD4Q96DR4 205 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 CXorf58Q96LI9 332 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 OR8B2Q96RD0 313 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 C1QTNF5Q9BXJ0 243 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 PLEKHA2Q9HB19 425 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 SLC23A1Q9UHI7 598 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 TMEM131Q92545 1883 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 SPTAN1Q13813 2472 aaKnown RBP7.34□□□□□ -1.23
SYNE1-211ENST00000413186 PLA2G10O15496 165 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 GPR12P47775 334 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 DHODHQ02127 395 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 SRSF9Q13242 221 aaKnown RBP eCLIP7.34□□□□□ -1.23
SYNE1-211ENST00000413186 SNAI3Q3KNW1 292 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 OR10X1Q8NGY0 326 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 UBALD1Q8TB05 177 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 LINC01560Q8TB33 94 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 GPX8Q8TED1 209 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 POM121Q96HA1 1249 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 ZNF2Q9BSG1 426 aaPredicted RBP7.34□□□□□ -1.23
SYNE1-211ENST00000413186 TMEM231Q9H6L2 316 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 LPAR3Q9UBY5 353 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 PPIAL4EA0A075B759 164 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 SERTM2A0A1B0GWG4 89 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 FAM221AA4D161 298 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 PPIAL4DF5H284 164 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 ZNHIT1O43257 154 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 NDUFA2O43678 99 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 PPIAL4FP0DN26 164 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 CALCRP30988 508 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 NPY4RP50391 375 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 SOHLH1Q5JUK2 328 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 SAXO1Q8IYX7 474 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 NECAP1Q8NC96 275 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 STXBP6Q8NFX7 210 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 RAB37Q96AX2 223 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 ZNF837Q96EG3 531 aaPredicted RBP7.34□□□□□ -1.23
SYNE1-211ENST00000413186 CTDSP1Q9GZU7 261 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 PPIAL4AQ9Y536 164 aa7.34□□□□□ -1.23
SYNE1-211ENST00000413186 C7orf66A4D0T2 115 aa7.34□□□□□ -1.24
SYNE1-211ENST00000413186 TUSC2O75896 110 aa7.34□□□□□ -1.24
SYNE1-211ENST00000413186 CST4P01036 141 aa7.34□□□□□ -1.24
SYNE1-211ENST00000413186 EPHA1P21709 976 aa7.34□□□□□ -1.24
SYNE1-211ENST00000413186 HRH1P35367 487 aa7.34□□□□□ -1.24
SYNE1-211ENST00000413186 PLAURQ03405 335 aa7.34□□□□□ -1.24
SYNE1-211ENST00000413186 ZNF626Q68DY1 528 aa7.34□□□□□ -1.24
SYNE1-211ENST00000413186 C12orf54Q6X4T0 127 aa7.34□□□□□ -1.24
SYNE1-211ENST00000413186 PCDH15Q96QU1 1955 aa7.34□□□□□ -1.24
SYNE1-211ENST00000413186 IGHV2OR16-5A0A0B4J2B6 119 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 HAND1O96004 215 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 ADRA2AP08913 450 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 GPR6P46095 362 aaPredicted RBP7.33□□□□□ -1.24
SYNE1-211ENST00000413186 NHLH2Q02577 135 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 KLF9Q13886 244 aaPredicted RBP7.33□□□□□ -1.24
SYNE1-211ENST00000413186 C1orf100Q5SVJ3 147 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 PXDC1Q5TGL8 231 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 MUC15Q8N387 334 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 EIF4E3Q8N5X7 224 aaKnown RBP7.33□□□□□ -1.24
SYNE1-211ENST00000413186 TMEM18Q96B42 140 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 MSI2Q96DH6 328 aaKnown RBP7.33□□□□□ -1.24
SYNE1-211ENST00000413186 RBMXL1Q96E39 390 aaKnown RBP7.33□□□□□ -1.24
SYNE1-211ENST00000413186 POM121L2Q96KW2 1035 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 OR2V2Q96R30 315 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 PRO1933Q9H354 126 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 CA10Q9NS85 328 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A10PA6NDY2 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A18PA6NE21 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A16PA6NEW6 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A20PA6NIJ5 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A8PA6NJQ4 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 FAM90A7PA6NKC0 464 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 RFPL4AA6NLU0 287 aa7.33□□□□□ -1.24
SYNE1-211ENST00000413186 HMSDA8MTL9 139 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms