RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 CD177Q8N6Q3 437 aa20.59■□□□□ 0.89
VRK2-202ENST00000412104 OR10Z1Q8NGY1 313 aa20.59■□□□□ 0.89
VRK2-202ENST00000412104 MAGT1Q9H0U3 335 aa20.59■□□□□ 0.89
VRK2-202ENST00000412104 Q9UFV3 132 aa20.59■□□□□ 0.89
VRK2-202ENST00000412104 IGLV3-9A0A075B6K5 115 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 PIGBOS1A0A0B4J2F0 54 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 A0A0G2JRQ6 117 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 RAB19A4D1S5 217 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 HBZP02008 142 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 PVALBP20472 110 aaPredicted RBP20.58■□□□□ 0.88
VRK2-202ENST00000412104 IL2RGP31785 369 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 NHLH2Q02577 135 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 MST1LQ2TV78 715 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 KRBOX4Q5JUW0 171 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 MRGPRGQ86SM5 289 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 OR2C3Q8N628 320 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 MRGPRDQ8TDS7 321 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 ARL11Q969Q4 196 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 SMIM8Q96KF7 97 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 OR2V2Q96R30 315 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 ARV1Q9H2C2 271 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 TMA7Q9Y2S6 64 aaKnown RBP20.58■□□□□ 0.88
VRK2-202ENST00000412104 SPTBN2O15020 2390 aa20.58■□□□□ 0.88
VRK2-202ENST00000412104 GLIPR1P48060 266 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 SULT1A2P50226 295 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 EWSR1Q01844 656 aaKnown RBP eCLIP20.57■□□□□ 0.88
VRK2-202ENST00000412104 ID3Q02535 119 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 SPRNQ5BIV9 151 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 UQCC3Q6UW78 93 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 DRAM1Q8N682 238 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 BPIFCQ8NFQ6 507 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 SAT2Q96F10 170 aaPredicted RBP20.57■□□□□ 0.88
VRK2-202ENST00000412104 CUL9Q8IWT3 2517 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 BORCS7-ASMTA0A0B4J1R7 106 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 TPRX1Q8N7U7 411 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 MEGF10Q96KG7 1140 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 LIN7CQ9NUP9 197 aaKnown RBP20.57■□□□□ 0.88
VRK2-202ENST00000412104 PLA2G2EQ9NZK7 142 aa20.57■□□□□ 0.88
VRK2-202ENST00000412104 CADP27708 2225 aa20.56■□□□□ 0.88
VRK2-202ENST00000412104 FAM24AA6NFZ4 105 aa20.56■□□□□ 0.88
VRK2-202ENST00000412104 IGKV1-39P01597 117 aa20.56■□□□□ 0.88
VRK2-202ENST00000412104 IGKV1D-39P04432 117 aa20.56■□□□□ 0.88
VRK2-202ENST00000412104 EPHA1P21709 976 aa20.56■□□□□ 0.88
VRK2-202ENST00000412104 PRDX2P32119 198 aa20.56■□□□□ 0.88
VRK2-202ENST00000412104 CFHR2P36980 270 aa20.56■□□□□ 0.88
VRK2-202ENST00000412104 RPS23P62266 143 aaKnown RBP20.56■□□□□ 0.88
VRK2-202ENST00000412104 C1QTNF12Q5T7M4 302 aa20.56■□□□□ 0.88
VRK2-202ENST00000412104 GFRALQ6UXV0 394 aa20.56■□□□□ 0.88
VRK2-202ENST00000412104 OR52L2PQ8NGH6 319 aa20.56■□□□□ 0.88
VRK2-202ENST00000412104 GPR146Q96CH1 333 aa20.56■□□□□ 0.88
VRK2-202ENST00000412104 ACACAQ13085 2346 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 IGSF23A1L1A6 192 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 SPRY3O43610 288 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 MED6O75586 246 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 NXPH3O95157 252 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 CAV2P51636 162 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 PXDC1Q5TGL8 231 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 GCSAMQ8N6F7 178 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 OR13A1Q8NGR1 328 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 PLEKHF2Q9H8W4 249 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 MMP26Q9NRE1 261 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 LYRM2Q9NU23 88 aaPredicted RBP20.55■□□□□ 0.88
VRK2-202ENST00000412104 BSNQ9UPA5 3926 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 DCHS1Q96JQ0 3298 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 IGKV1D-17A0A075B6S4 117 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 PITX3O75364 302 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 ZNF737O75373 536 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 SLC25A6P12236 298 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 ZNF16P17020 682 aaPredicted RBP20.55■□□□□ 0.88
VRK2-202ENST00000412104 CD40P25942 277 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 LPAR6P43657 344 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 VAMP2P63027 116 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 PAX5Q02548 391 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 FAM53AQ6NSI3 398 aaPredicted RBP20.55■□□□□ 0.88
VRK2-202ENST00000412104 MOGAT3Q86VF5 341 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 FAM90A1Q86YD7 464 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 ZNF645Q8N7E2 425 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 SUN5Q8TC36 379 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 MRPL37Q9BZE1 423 aaKnown RBP20.55■□□□□ 0.88
VRK2-202ENST00000412104 TOLLIPQ9H0E2 274 aa20.55■□□□□ 0.88
VRK2-202ENST00000412104 A0A1B0GU03 582 aa20.54■□□□□ 0.88
VRK2-202ENST00000412104 NUDT19A8MXV4 375 aa20.54■□□□□ 0.88
VRK2-202ENST00000412104 SSTR5P35346 364 aa20.54■□□□□ 0.88
VRK2-202ENST00000412104 RNASE11Q8TAA1 199 aaKnown RBP20.54■□□□□ 0.88
VRK2-202ENST00000412104 LURAP1Q96LR2 239 aa20.54■□□□□ 0.88
VRK2-202ENST00000412104 GINS3Q9BRX5 216 aa20.54■□□□□ 0.88
VRK2-202ENST00000412104 SH3BGRL2Q9UJC5 107 aa20.54■□□□□ 0.88
VRK2-202ENST00000412104 ZNF585BQ52M93 769 aa20.53■□□□□ 0.88
VRK2-202ENST00000412104 ITLN1Q8WWA0 313 aa20.53■□□□□ 0.88
VRK2-202ENST00000412104 NINJ1Q92982 152 aa20.53■□□□□ 0.88
VRK2-202ENST00000412104 LSM10Q969L4 123 aaKnown RBP20.53■□□□□ 0.88
VRK2-202ENST00000412104 NARS2Q96I59 477 aaKnown RBP20.53■□□□□ 0.88
VRK2-202ENST00000412104 OR2D2Q9H210 308 aa20.53■□□□□ 0.88
VRK2-202ENST00000412104 ESRP2Q9H6T0 727 aaKnown RBP20.53■□□□□ 0.88
VRK2-202ENST00000412104 MMP9P14780 707 aa20.53■□□□□ 0.88
VRK2-202ENST00000412104 M6PRP20645 277 aa20.53■□□□□ 0.88
VRK2-202ENST00000412104 PRR30Q53SZ7 412 aaPredicted RBP20.53■□□□□ 0.88
VRK2-202ENST00000412104 ZGRF1Q86YA3 2104 aa20.53■□□□□ 0.88
VRK2-202ENST00000412104 MS4A7Q9GZW8 240 aaPredicted RBP20.53■□□□□ 0.88
VRK2-202ENST00000412104 HRH4Q9H3N8 390 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms