RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 NT5CQ8TCD5 201 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 NUDT8Q8WV74 236 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 KISS1RQ969F8 398 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-202ENST00000411767 PLEKHB2Q96CS7 222 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 CDCA4Q9BXL8 241 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 CNIH4Q9P003 139 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 IL36RNQ9UBH0 155 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 CTXND1A0A1B0GTU2 59 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 A0A1B0GX78 115 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 PAX4O43316 350 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 LILRA1O75019 489 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 THBDP07204 575 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 VSIG10L2P0DP72 767 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 LILRA4P59901 499 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF345Q14585 488 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF678Q5SXM1 525 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 NCMAPQ5T1S8 102 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 IER5LQ5T953 404 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 C1orf174Q8IYL3 243 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 RASL10AQ92737 203 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 MESP1Q9BRJ9 268 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 C14orf132Q9NPU4 83 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 ST6GALNAC2Q9UJ37 374 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 KIDINS220Q9ULH0 1771 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 IFT172Q9UG01 1749 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 MYH11P35749 1972 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 SMIM35A0A1B0GVV1 85 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 SOD2P04179 222 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 JAM2P57087 298 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 DHRS2Q13268 280 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 KLF9Q13886 244 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-202ENST00000411767 C22orf39Q6P5X5 142 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM30AQ9NV96 361 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 MROH1Q8NDA8 1641 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 PRAG1Q86YV5 1406 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 CENPVL3A0A0U1RRI6 287 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 ADARB2-AS1A8MUL3 147 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 HLA-DQB1P01920 261 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 STATHP02808 62 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 LGALS2P05162 132 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 C1SP09871 688 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 CD68P34810 354 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-202ENST00000411767 HTR6P50406 440 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 MDS2Q8NDY4 140 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF680Q8NEM1 530 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 APOBEC3DQ96AK3 386 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-202ENST00000411767 C21orf62Q9NYP8 219 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 IQGAP1P46940 1657 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 GAGE12BA1L429 117 aa4.03□□□□□ -1.77
PTPN13-202ENST00000411767 UBE2CO00762 179 aa4.03□□□□□ -1.77
PTPN13-202ENST00000411767 BAHD1Q8TBE0 780 aaPredicted RBP4.03□□□□□ -1.77
PTPN13-202ENST00000411767 SLC17A5Q9NRA2 495 aa4.03□□□□□ -1.77
PTPN13-202ENST00000411767 SMPXQ9UHP9 88 aa4.03□□□□□ -1.77
PTPN13-202ENST00000411767 D6R8Y8 96 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 FOXD2O60548 495 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-202ENST00000411767 CST7O76096 145 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 CPMP14384 443 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 CXCL5P42830 114 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 TNFRSF4P43489 277 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 AWAT1Q58HT5 328 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 C4orf48Q5BLP8 95 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 FAM74A4Q5TZK3 123 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 TSACCQ96A04 125 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-202ENST00000411767 LOXL4Q96JB6 756 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 PRADC1Q9BSG0 188 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 IL23AQ9NPF7 189 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 ATP7AQ04656 1500 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 LILRA5A6NI73 299 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 GAPDHP04406 335 aaKnown RBP4.02□□□□□ -1.77
PTPN13-202ENST00000411767 IL6RP08887 468 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-202ENST00000411767 FAM106CPP0CH98 169 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 ZP1P60852 638 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 DAD1P61803 113 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 HOXC5Q00444 222 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 RGNQ15493 299 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 CIARTQ8N365 385 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-202ENST00000411767 OR8B12Q8NGG6 310 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 EMID1Q96A84 441 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-202ENST00000411767 COQ2Q96H96 371 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 SLC26A1Q9H2B4 701 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 V9GYH0 126 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 LMTK2Q8IWU2 1503 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 SETD1BQ9UPS6 1966 aaKnown RBP4.02□□□□□ -1.77
PTPN13-202ENST00000411767 CDC42BPGQ6DT37 1551 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 A0A1B0GX51 115 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 A0A1W2PR80 420 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 C22orf46C9J442 243 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 CLEC2LP0C7M8 214 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 RTP5Q14D33 572 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF146Q15072 292 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 FMC1Q96HJ9 113 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 APOOQ9BUR5 198 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 JCADQ9P266 1359 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 TRGV2A0A075B6R0 118 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 ATXN7O15265 892 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-202ENST00000411767 TGFAP01135 160 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 HPXP02790 462 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 PRTN3P24158 256 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 GAS1P54826 345 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 RPS24P62847 133 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms