RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 RP2O75695 350 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 OR5AC1P0C628 307 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 IGHV3-43DP0DP04 118 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 GZMKP49863 264 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 RND3P61587 244 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 SRSF1Q07955 248 aaKnown RBP eCLIP11.66□□□□□ -0.54
GPNMB-203ENST00000409458 Q5BKY6 102 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 LPCAT3Q6P1A2 487 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 OR2T35Q8NGX2 323 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 COQ8AQ8NI60 647 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 OR6C3Q9NZP0 311 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 SLC25A10Q9UBX3 287 aaPredicted RBP11.66□□□□□ -0.54
GPNMB-203ENST00000409458 SHPKQ9UHJ6 478 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 OPN4Q9UHM6 478 aa11.66□□□□□ -0.54
GPNMB-203ENST00000409458 ZNF462Q96JM2 2506 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 SPINT2O43291 252 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 NDUFB7P17568 137 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 HLA-GP17693 338 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 PPP1CCP36873 323 aaKnown RBP11.65□□□□□ -0.54
GPNMB-203ENST00000409458 LUMP51884 338 aaPredicted RBP11.65□□□□□ -0.54
GPNMB-203ENST00000409458 RAP2BP61225 183 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 LTC4SQ16873 150 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 C17orf58Q2M2W7 97 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 SP6Q3SY56 376 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 TBC1D26Q86UD7 250 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 FAM185AQ8N0U4 392 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 GALNT14Q96FL9 552 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 GPHA2Q96T91 129 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 TOLLIPQ9H0E2 274 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 CALYQ9NYX4 217 aa11.65□□□□□ -0.54
GPNMB-203ENST00000409458 KLF2Q9Y5W3 355 aaPredicted RBP11.65□□□□□ -0.54
GPNMB-203ENST00000409458 MPPED1O15442 326 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 TNFSF12O43508 249 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 ADAP1O75689 374 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 IGLV2-14P01704 120 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 IGHV2-70P01814 119 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 CGB3P0DN86 165 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 CGB7P0DN87 165 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 GZMHP20718 246 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 CDKN1AP38936 164 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 HTD2P86397 168 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 TMEM187Q14656 261 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 BVESQ8NE79 360 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 OR11H4Q8NGC9 324 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 OR2S2Q9NQN1 319 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 KCNS2Q9ULS6 477 aa11.65□□□□□ -0.55
GPNMB-203ENST00000409458 DCHS2Q6V1P9 2916 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 TRGV10A0A0A0MS01 117 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 FAM25EA8MYX2 175 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 PHF1O43189 567 aaPredicted RBP11.64□□□□□ -0.55
GPNMB-203ENST00000409458 OR8U9P0C7N5 309 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 DNASE1P24855 282 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 KCNJ8Q15842 424 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 AVPI1Q5T686 147 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 OR8U1Q8NH10 309 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 NEU4Q8WWR8 484 aaPredicted RBP11.64□□□□□ -0.55
GPNMB-203ENST00000409458 NINJ1Q92982 152 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 TP53RKQ96S44 253 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 C19orf12Q9NSK7 152 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 KAAG1Q9UBP8 84 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 KCNIP3Q9Y2W7 256 aa11.64□□□□□ -0.55
GPNMB-203ENST00000409458 RBM7Q9Y580 266 aaKnown RBP11.64□□□□□ -0.55
GPNMB-203ENST00000409458 DOPEY1Q5JWR5 2465 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 C3orf85A0A1B0GTC6 90 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 F2RL2O00254 374 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 NDUFB3O43676 98 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 DAOP14920 347 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 OMGP23515 440 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 SRSF4Q08170 494 aaKnown RBP11.63□□□□□ -0.55
GPNMB-203ENST00000409458 CMTM1Q8IZ96 169 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 DRAXINQ8NBI3 349 aaPredicted RBP11.63□□□□□ -0.55
GPNMB-203ENST00000409458 GRPEL2Q8TAA5 225 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 ASB13Q8WXK3 278 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 MSI2Q96DH6 328 aaKnown RBP11.63□□□□□ -0.55
GPNMB-203ENST00000409458 HYLS1Q96M11 299 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 PDCD10Q9BUL8 212 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 SUCNR1Q9BXA5 334 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 RANBP3Q9H6Z4 567 aaPredicted RBP11.63□□□□□ -0.55
GPNMB-203ENST00000409458 RAB18Q9NP72 206 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 JPT1Q9UK76 154 aa11.63□□□□□ -0.55
GPNMB-203ENST00000409458 KBTBD11-OT1A0A1B0GTJ5 212 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 MPTX1A8MV57 137 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 DVL1O14640 695 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 NDUFA2O43678 99 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 PGLYRP1O75594 196 aaPredicted RBP11.62□□□□□ -0.55
GPNMB-203ENST00000409458 GOSR1O95249 250 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 FSTL3O95633 263 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 LOXL3P58215 753 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 MRPS11P82912 194 aaKnown RBP11.62□□□□□ -0.55
GPNMB-203ENST00000409458 ZNF273Q14593 569 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 LRRC10Q5BKY1 277 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 LIAT1Q6ZQX7 453 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 LHFPL5Q8TAF8 219 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 GLYATL2Q8WU03 294 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 CORO2AQ92828 525 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 C5orf30Q96GV9 206 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 SEC22AQ96IW7 307 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 OR2D2Q9H210 308 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 CLN8Q9UBY8 286 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms