RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 HLA-DRB3P79483 266 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 PCOLCEQ15113 449 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 FAM78BQ5VT40 261 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 NCR3LG1Q68D85 454 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 LHFPL4Q7Z7J7 247 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 LURAP1LQ8IV03 231 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 SELENOHQ8IZQ5 122 aaKnown RBP7.13□□□□□ -1.27
SNX13-201ENST00000409076 ZIC4Q8N9L1 334 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 OR52L2PQ8NGH6 319 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 OR51G1Q8NGK1 321 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 OR13D1Q8NGV5 346 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 OR2V1Q8NHB1 315 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 CLDN23Q96B33 292 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 OR2D2Q9H210 308 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 TMEM100Q9NV29 134 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 MTCH1Q9NZJ7 389 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 XKRY2A2RUG3 117 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 PAGE4O60829 102 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 ZNF737O75373 536 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 FGF7P21781 194 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 RPL29P47914 159 aaKnown RBP7.13□□□□□ -1.27
SNX13-201ENST00000409076 CASP6P55212 293 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 ARL6IP1Q15041 203 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 P2RY6Q15077 328 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 PRAMEF6Q5VXH4 476 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 PINX1Q96BK5 328 aaKnown RBP7.13□□□□□ -1.27
SNX13-201ENST00000409076 POMT1Q9Y6A1 747 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 SELENOKQ9Y6D0 94 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 V9GYS6 101 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 ZNF320A2RRD8 509 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 BTBD17A6NE02 478 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 OR5H1A6NKK0 313 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 CBR3O75828 277 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 IGHMP01871 453 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 NDUFB7P17568 137 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 Q3ZCU0 254 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 Q6ZRM9 215 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 C16orf82Q7Z2V1 217 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 TIPARPQ7Z3E1 657 aaKnown RBP7.13□□□□□ -1.27
SNX13-201ENST00000409076 NABP1Q96AH0 204 aa7.13□□□□□ -1.27
SNX13-201ENST00000409076 MSI2Q96DH6 328 aaKnown RBP7.13□□□□□ -1.27
SNX13-201ENST00000409076 IGHV3OR15-7A0A075B7D8 119 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 TSTD3H0UI37 97 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 ST8SIA5O15466 376 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HIST1H2BKO60814 126 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HIST1H2BJP06899 126 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 UMODP07911 640 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 SMIM6P0DI80 62 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HIST1H2BOP23527 126 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HIST1H2BBP33778 126 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HIST1H2BDP58876 126 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HIST1H2BCP62807 126 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HIST2H2BEQ16778 126 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.12□□□□□ -1.27
SNX13-201ENST00000409076 TCF23Q7RTU1 214 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HIST1H2BHQ93079 126 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 APH1AQ96BI3 265 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 SGK494Q96LW2 274 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 SIGLEC12Q96PQ1 595 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HIST1H2BNQ99877 126 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HIST1H2BMQ99879 126 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 GNG12Q9UBI6 72 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 PSG11Q9UQ72 335 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 ZNF503-AS2A6NEH8 195 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 SEC11BP0C7V7 166 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 WNT5AP41221 380 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 TCTAP57738 103 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 RAC1P63000 192 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 FFAR4Q5NUL3 377 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 SSX7Q7RTT5 188 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 ERASQ7Z444 233 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 OR1L1Q8NH94 360 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 SPSB1Q96BD6 273 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 FAM122AQ96E09 287 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 OR4C12Q96R67 309 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 OR2J1Q9GZK6 312 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 CBLN4Q9NTU7 201 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 TMED3Q9Y3Q3 217 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 ATRXP46100 2492 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 ZGRF1Q86YA3 2104 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 C1QTNF9BB2RNN3 333 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 HOXB1P14653 301 aaPredicted RBP7.12□□□□□ -1.27
SNX13-201ENST00000409076 RAC2P15153 192 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 SUMO3P55854 103 aaPredicted RBP7.12□□□□□ -1.27
SNX13-201ENST00000409076 UBE2NP61088 152 aaKnown RBP7.12□□□□□ -1.27
SNX13-201ENST00000409076 SLC38A11Q08AI6 406 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 ARL16Q0P5N6 197 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 KIAA1644Q3SXP7 199 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 IMMP2LQ96T52 175 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 TMEM222Q9H0R3 208 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 CDH20Q9HBT6 801 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 Q9N2K0 584 aa7.12□□□□□ -1.27
SNX13-201ENST00000409076 A0A1W2PPV4 95 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 LRRC3CA6NJW4 275 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 PPP5D1E7EU14 171 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 PGLYRP1O75594 196 aaPredicted RBP7.11□□□□□ -1.27
SNX13-201ENST00000409076 SRP19P09132 144 aaKnown RBP7.11□□□□□ -1.27
SNX13-201ENST00000409076 FOSL1P15407 271 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 HLA-GP17693 338 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 LSM6P62312 80 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms