RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 RBM38Q9H0Z9 239 aaKnown RBP13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MEGF9Q9H1U4 602 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 HILPDAQ9Y5L2 63 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 CUBNO60494 3623 aa13.92□□□□□ -0.18
PTCHD3P3-201ENST00000403073 TRDCB7Z8K6 153 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 BUB1B-PAK6H3BSN5 160 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 XRCC3O43542 346 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 SSX5O60225 188 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 IGHV4-59P01825 116 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 PTHLHP12272 177 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ELK1P19419 428 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 IER3P46695 156 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 HLA-DRB3P79483 266 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 HTD2P86397 168 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 PLA1AQ53H76 456 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MINOS1Q5TGZ0 78 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 LDLRAD3Q86YD5 345 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 CMTM3Q96MX0 182 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ST6GALNAC5Q9BVH7 336 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MMP28Q9H239 520 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 AUNIPQ9H7T9 357 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 DPM3Q9P2X0 92 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 RSL24D1Q9UHA3 163 aaKnown RBP13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MGAT4AQ9UM21 535 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MINOS1-NBL1R4GNA1 71 aa13.91□□□□□ -0.18
PTCHD3P3-201ENST00000403073 NAV3Q8IVL0 2385 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 IGKV1D-8A0A087WSZ0 117 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 LEUTXA8MZ59 168 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 LY6LH3BQJ8 138 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 SLC31A2O15432 143 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 APOA1P02647 267 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 GSTT2P0CG29 244 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 GSTT2BP0CG30 244 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 PPP1CCP36873 323 aaKnown RBP13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ZNF134P52741 427 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 GNG2P59768 71 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 PNLIPRP3Q17RR3 467 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 TMEM30BQ3MIR4 351 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 MORN2Q502X0 79 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 TMEM69Q5SWH9 247 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 ZNF439Q8NDP4 499 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 JPT1Q9UK76 154 aa13.9□□□□□ -0.18
PTCHD3P3-201ENST00000403073 IGKV1-6A0A0C4DH72 117 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 CTDSP2O14595 271 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 MNDAP41218 407 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 RAB13P51153 203 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 TAS2R20P59543 309 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 UBA52P62987 128 aaKnown RBP13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 PITPNAQ00169 270 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 MADCAM1Q13477 382 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 CT45A1Q5HYN5 189 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 TPTE2P1Q5T6R2 138 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 OR10X1Q8NGY0 326 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 CT45A3Q8NHU0 189 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 SSMEM1Q8WWF3 244 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 SSX3Q99909 188 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 CCDC59Q9P031 241 aaKnown RBP13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 OR1A1Q9P1Q5 309 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 DSCAML1Q8TD84 2053 aa13.89□□□□□ -0.19
PTCHD3P3-201ENST00000403073 SMIM31A0A1B0GVY4 71 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 DPPA5A6NC42 116 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 FAM25AB3EWG3 89 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 FAM25CB3EWG5 89 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 FAM25GB3EWG6 89 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 TRIM77I1YAP6 450 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 FABP7O15540 132 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 YPEL1O60688 119 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 DTYMKP23919 212 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 DIAPH2-AS1Q14236 149 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 HERPUD1Q15011 391 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 LINC00311Q8N616 119 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 C8orf31Q8N9H6 132 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 CREB3L1Q96BA8 519 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 YPEL2Q96QA6 119 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 DPAGT1Q9H3H5 408 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 SLC23A1Q9UHI7 598 aa13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 MRPS7Q9Y2R9 242 aaKnown RBP13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 AMMECR1Q9Y4X0 333 aaPredicted RBP13.88□□□□□ -0.19
PTCHD3P3-201ENST00000403073 H3BUX3 64 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 CLDN34H7C241 214 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 RGS5O15539 181 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 HLA-DQB1P01920 261 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 CEACAM3P40198 252 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 CEACAM6P40199 344 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 KIR2DS4P43632 304 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 KIR2DS1Q14954 304 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 SRSF7Q16629 238 aaKnown RBP eCLIP13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 LRRC75BQ2VPJ9 315 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 Q3ZCU0 254 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 IGSF11Q5DX21 431 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 STEAP3Q658P3 488 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 SLC25A48Q6ZT89 311 aaKnown RBP13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 TMEM86BQ8N661 226 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 OR4A4PQ8NGN8 299 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 PIFOQ8TCI5 191 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 GCDHQ92947 438 aaPredicted RBP13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 OCSTAMPQ9BR26 566 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 DCUN1D5Q9BTE7 237 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 CHIAQ9BZP6 476 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 SLIRPQ9GZT3 109 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms