RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 ABHD14AQ9BUJ0 271 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 RNF167Q9H6Y7 350 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 CHODLQ9H9P2 273 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 J3QR06 171 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 VGLL4Q14135 290 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 C9orf50Q5SZB4 431 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 MBNL2Q5VZF2 373 aaKnown RBP7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 CCL27Q9Y4X3 112 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 TET2Q6N021 2002 aaPredicted RBP7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 C7orf77A4D0Y5 90 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 HSPB1P04792 205 aaKnown RBP7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 CXCL12P48061 93 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 RBM3P98179 157 aaKnown RBP7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 DEFB115Q30KQ5 88 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 ZNF880Q6PDB4 577 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 DLC1Q96QB1 1528 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 SCN11AQ9UI33 1791 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 CLPSL1A2RUU4 121 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 J3KRW8 73 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 ZNF585BQ52M93 769 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 GDF7Q7Z4P5 450 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 DLX4Q92988 240 aaPredicted RBP7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 FZD5Q13467 585 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 TMEM108Q6UXF1 575 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 TMEM190Q8WZ59 177 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 LAMTOR2Q9Y2Q5 125 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 PDCD11Q14690 1871 aaKnown RBP7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 KIAA0556O60303 1618 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 FAM159AQ6UWV7 190 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 PTGER1P34995 402 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 PITX1P78337 314 aaPredicted RBP7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 ELAVL1Q15717 326 aaKnown RBP7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 NPVFQ9HCQ7 196 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 C9orf172C9J069 976 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 SYNGR3O43761 229 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 TMEM42Q69YG0 159 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 MARVELD1Q9BSK0 173 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 LMTK2Q8IWU2 1503 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 SOD2P04179 222 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 CFHP08603 1231 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 C1QTNF9P0C862 333 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 RACK1P63244 317 aaKnown RBP7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 FAM106AQ4KMX7 169 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 PQLC2Q6ZP29 291 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 PRSS45Q7RTY3 260 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 BAALCQ8WXS3 180 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 FGF14Q92915 247 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 DAPP1Q9UN19 280 aa7.59□□□□□ -1.19
CACNA1C-220ENST00000399655 TLCD2A6NGC4 264 aa7.59□□□□□ -1.2
CACNA1C-220ENST00000399655 MAGEA5P43359 124 aa7.59□□□□□ -1.2
CACNA1C-220ENST00000399655 INSM1Q01101 510 aaPredicted RBP7.59□□□□□ -1.2
CACNA1C-220ENST00000399655 PAX1P15863 534 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 AVPR2P30518 371 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 GFRA1P56159 465 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 UMODL1-AS1Q8N2C9 162 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 TRDCB7Z8K6 153 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 ZNF114Q8NC26 417 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 ROBO2Q9HCK4 1378 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 NGFP01138 241 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 PF4V1P10720 104 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 DEFB110Q30KQ9 67 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 TRAV5A0A0B4J249 113 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 MKRN2OSH3BPM6 223 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 CD8AP01732 235 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 ADMP35318 185 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 OCIAD2Q56VL3 154 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 C10orf35Q96D05 121 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 SCGB3A1Q96QR1 104 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 ALG1L2C9J202 215 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 C1orf174Q8IYL3 243 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 FAM57AQ8TBR7 257 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 UBL5Q9BZL1 73 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 GREB1Q4ZG55 1949 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 IGKV3D-11A0A0A0MRZ8 115 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 RNF222A6NCQ9 220 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 ZNF840PA6NDX5 716 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 FCN3O75636 299 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 IGKV3-11P04433 115 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 PSG6Q00889 435 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 LILRA2Q8N149 483 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 DEFB108BQ8NET1 73 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 SLC25A38Q96DW6 304 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 A0A0D9SEW6 157 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 PDXPQ96GD0 296 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 HEXA-AS1Q9H8Q6 139 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 NDUFAF3Q9BU61 184 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 CD163L1Q9NR16 1453 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 TRBV20OR9-2A0A075B6H5 130 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 TRBV20-1A0A075B6N2 111 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 YPEL5P62699 121 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 CTAG1AP78358 180 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 SYT14P1Q58G82 188 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 PNKDQ8N490 385 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 SIGLEC11Q96RL6 698 aa7.58□□□□□ -1.2
CACNA1C-220ENST00000399655 MESP2Q0VG99 397 aa7.57□□□□□ -1.2
CACNA1C-220ENST00000399655 RTP5Q14D33 572 aa7.57□□□□□ -1.2
CACNA1C-220ENST00000399655 SYPL1Q16563 259 aa7.57□□□□□ -1.2
CACNA1C-220ENST00000399655 CADM4Q8NFZ8 388 aa7.57□□□□□ -1.2
CACNA1C-220ENST00000399655 TOMM7Q9P0U1 55 aa7.57□□□□□ -1.2
CACNA1C-220ENST00000399655 ZMIZ1Q9ULJ6 1067 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms