RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 SSSCA1O60232 199 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 WISP2O76076 250 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 CST7O76096 145 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 DKK1O94907 266 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 NKX2-1P43699 371 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 SLC6A8P48029 635 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 MTCP1P56278 107 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 SOX8P57073 446 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 FXYD4P59646 89 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 ZNF787Q6DD87 383 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 C6orf201Q7Z4U5 140 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 ABHD12BQ7Z5M8 362 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 ODF3L1Q8IXM7 274 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 TMEM217Q8N7C4 229 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 OR10S1Q8NGN2 331 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 SSC4DQ8WTU2 575 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 ZCCHC14Q8WYQ9 949 aaKnown RBP8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 PSMF1Q92530 271 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 SDSLQ96GA7 329 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 FAM71F1Q96KD3 344 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 SLC2A9Q9NRM0 540 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 OR6C3Q9NZP0 311 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 C19orf25Q9UFG5 118 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 CFAP46Q8IYW2 2715 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 PHF3Q92576 2039 aaKnown RBP8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 LOC102723996A0A087X1L8 192 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 IGKV1-9A0A0C4DH69 117 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 ZNF850A8MQ14 1090 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 PHF1O43189 567 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 ZNF205O95201 554 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 HRASP01112 189 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 CHRNB4P30926 498 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 CDKN1BP46527 198 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 ZNF41P51814 821 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 PRDX4Q13162 271 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 TMEM241Q24JQ0 296 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 DMRTC1Q5HYR2 192 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 CENPVQ7Z7K6 275 aaPredicted RBP8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 C11orf40Q8WZ69 217 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 NECAP2Q9NVZ3 263 aa8.7□□□□□ -1.02
HMGCLL1-205ENST00000398661 PRR14LQ5THK1 2151 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 NCKAP5O14513 1909 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 CEBPZOSA8MTT3 80 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 MSTNO14793 375 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 CDS2O95674 445 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 SELENOTP62341 195 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 IL24Q13007 206 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 ENDOGQ14249 297 aaKnown RBP8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 BSXQ3C1V8 233 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 LEMD1Q68G75 181 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 ETFRF1Q6IPR1 90 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 TOMM20LQ6UXN7 152 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 MEX3BQ6ZN04 569 aaKnown RBP8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 WDFY1Q8IWB7 410 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 CISD2Q8N5K1 135 aaKnown RBP8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 OR11L1Q8NGX0 322 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 SIGLEC12Q96PQ1 595 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 TM2D1Q9BX74 207 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 MAGT1Q9H0U3 335 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 CHCHD2Q9Y6H1 151 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 TNRC6AQ8NDV7 1962 aaKnown RBP8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 C20orf202A1L168 122 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 PINLYPA6NC86 204 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 MAP1LC3B2A6NCE7 125 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 RFPL3SP0C7P2 107 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 GP1BBP13224 206 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 ZNF17P17021 662 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 CCL11P51671 97 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 RANP62826 216 aaKnown RBP8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 ZNF92Q03936 586 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 ZNF154Q13106 437 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 LCN15Q6UWW0 184 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 CYP2G1PQ6ZSU1 146 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 DTX1Q86Y01 620 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 TMEM256Q8N2U0 113 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 OR8B12Q8NGG6 310 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 OR2T10Q8NGZ9 312 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 OIT3Q8WWZ8 545 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 ASB10Q8WXI3 467 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 EXTL1Q92935 676 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 SPACA9Q96E40 222 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 ZNF845Q96IR2 970 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 ATP5SQ99766 215 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 SMIM7Q9BQ49 75 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 AGMATQ9BSE5 352 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 MAP1LC3BQ9GZQ8 125 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 DEPPQ9NTK1 212 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 PLEKHJ1Q9NW61 149 aa8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 AURKAIP1Q9NWT8 199 aaPredicted RBP8.69□□□□□ -1.02
HMGCLL1-205ENST00000398661 TMED7-TICAM2A0A0A6YYA0 188 aa8.68□□□□□ -1.02
HMGCLL1-205ENST00000398661 TYMSP04818 313 aa8.68□□□□□ -1.02
HMGCLL1-205ENST00000398661 PTGDSP41222 190 aa8.68□□□□□ -1.02
HMGCLL1-205ENST00000398661 RRADP55042 308 aa8.68□□□□□ -1.02
HMGCLL1-205ENST00000398661 FGF8P55075 233 aaPredicted RBP8.68□□□□□ -1.02
HMGCLL1-205ENST00000398661 RPL23P62829 140 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-205ENST00000398661 RAC1P63000 192 aa8.68□□□□□ -1.02
HMGCLL1-205ENST00000398661 BAXQ07812 192 aa8.68□□□□□ -1.02
HMGCLL1-205ENST00000398661 EIF3IQ13347 325 aaKnown RBP8.68□□□□□ -1.02
HMGCLL1-205ENST00000398661 KISS1Q15726 138 aa8.68□□□□□ -1.02
HMGCLL1-205ENST00000398661 TDRG1Q3Y452 100 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms