RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 OPN4Q9UHM6 478 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 EIF3GO75821 320 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMU1-201ENST00000397149 LEPROTL1O95214 131 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 FAM3BP58499 235 aaPredicted RBP10.81□□□□□ -0.68
SMU1-201ENST00000397149 HIST1H1AQ02539 215 aaPredicted RBP10.81□□□□□ -0.68
SMU1-201ENST00000397149 SSPNQ14714 243 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 CCDC144NLQ6NUI1 221 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 UBALD2Q8IYN6 164 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 FAM89BQ8N5H3 189 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 APOBEC4Q8WW27 367 aaKnown RBP10.81□□□□□ -0.68
SMU1-201ENST00000397149 TMEM70Q9BUB7 260 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 LMO7Q8WWI1 1683 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 A1L4Q6 167 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 RBMY1BA6NDE4 496 aaKnown RBP10.81□□□□□ -0.68
SMU1-201ENST00000397149 RBMY1EA6NEQ0 496 aaKnown RBP10.81□□□□□ -0.68
SMU1-201ENST00000397149 RBMY1DP0C7P1 496 aaKnown RBP10.81□□□□□ -0.68
SMU1-201ENST00000397149 RBMY1A1P0DJD3 496 aaKnown RBP10.81□□□□□ -0.68
SMU1-201ENST00000397149 RBMY1CP0DJD4 496 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 KIR2DL4Q99706 377 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 MYOM1P52179 1685 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 HOXA3O43365 443 aaPredicted RBP10.81□□□□□ -0.68
SMU1-201ENST00000397149 PCMT1P22061 227 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 CDKN2AP42771 156 aaKnown RBP10.81□□□□□ -0.68
SMU1-201ENST00000397149 HBBP68871 147 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 SSBP1Q04837 148 aaKnown RBP10.81□□□□□ -0.68
SMU1-201ENST00000397149 BIVMQ86UB2 503 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 OR10AG1Q8NH19 301 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 CCL13Q99616 98 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 VGLL1Q99990 258 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 TNFRSF18Q9Y5U5 241 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 ANKRD26Q9UPS8 1709 aa10.81□□□□□ -0.68
SMU1-201ENST00000397149 CICQ96RK0 1608 aaPredicted RBP10.81□□□□□ -0.68
SMU1-201ENST00000397149 NKX2-6A6NCS4 301 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 CTAG2O75638 210 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 GAPDHP04406 335 aaKnown RBP10.8□□□□□ -0.68
SMU1-201ENST00000397149 CTLA4P16410 223 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 CNTFRP26992 372 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 TDGF1P3P51864 188 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 STARD6P59095 220 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 PRICKLE4Q2TBC4 344 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 KIAA1644Q3SXP7 199 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 FAM106AQ4KMX7 169 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 UBE2DNLQ8IWF7 75 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 MVB12AQ96EY5 273 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 SOCS1O15524 211 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 ETHE1O95571 254 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 OR8B12Q8NGG6 310 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 ZNF707Q96C28 371 aaPredicted RBP10.8□□□□□ -0.68
SMU1-201ENST00000397149 CEACAM4O75871 244 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 ISG15P05161 165 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 GP1BAP07359 652 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 IBA57Q5T440 356 aaKnown RBP10.8□□□□□ -0.68
SMU1-201ENST00000397149 PMS2CLQ68D20 193 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 LHX8Q68G74 356 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 A8MWL6 223 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 APC2O95996 2303 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 CTSDP07339 412 aaPredicted RBP10.8□□□□□ -0.68
SMU1-201ENST00000397149 FAM159AQ6UWV7 190 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 UBR1Q8IWV7 1749 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 SLC25A37Q9NYZ2 338 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 SF3B6Q9Y3B4 125 aaKnown RBP10.8□□□□□ -0.68
SMU1-201ENST00000397149 PTPRZ1P23471 2315 aaPredicted RBP10.8□□□□□ -0.68
SMU1-201ENST00000397149 LINC01387J3KSC0 135 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 SUMO3P55854 103 aaPredicted RBP10.8□□□□□ -0.68
SMU1-201ENST00000397149 CKS1BP61024 79 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 MEF2CQ06413 473 aaPredicted RBP10.8□□□□□ -0.68
SMU1-201ENST00000397149 CT55Q8WUE5 264 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 GALNT14Q96FL9 552 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 FER1L6Q2WGJ9 1857 aa10.8□□□□□ -0.68
SMU1-201ENST00000397149 F12P00748 615 aaPredicted RBP10.79□□□□□ -0.68
SMU1-201ENST00000397149 FAM53BQ14153 422 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 TMEM249Q2WGJ8 235 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 PAQR9Q6ZVX9 377 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 OR2V2Q96R30 315 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 MS4A5Q9H3V2 200 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 FMN2Q9NZ56 1722 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 A0A1B0GWB2 263 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 CCR5P51681 352 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 ZNF488Q96MN9 340 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 RP1P56715 2156 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 NDUFB4O95168 129 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 TMEM177Q53S58 311 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 LYZL2Q7Z4W2 148 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 PTP4A1Q93096 173 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 YIPF6Q96EC8 236 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 ZNF48Q96MX3 618 aaPredicted RBP10.79□□□□□ -0.68
SMU1-201ENST00000397149 DUX3Q96PT4 197 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 AKIP1Q9NQ31 210 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 PDLIM7Q9NR12 457 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 TMEM106BQ9NUM4 274 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 IL19Q9UHD0 177 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 TRBV20OR9-2A0A075B6H5 130 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 PPIAL4EA0A075B759 164 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 C7orf77A4D0Y5 90 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 PPIAL4DF5H284 164 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 SMIM13P0DJ93 91 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 PPIAL4FP0DN26 164 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 FGF14Q92915 247 aa10.79□□□□□ -0.68
SMU1-201ENST00000397149 PPIAL4AQ9Y536 164 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms