RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CCL28Q9NRJ3 127 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 SLC2A8Q9NY64 477 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 A0A1W2PR80 420 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 AREGP15514 252 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 RAB24Q969Q5 203 aa13.56□□□□□ -0.24
GNE-202ENST00000396594 ZNF552Q9H707 407 aaPredicted RBP13.56□□□□□ -0.24
GNE-202ENST00000396594 IGKV3D-11A0A0A0MRZ8 115 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 TMEM11P17152 192 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 P2RX4Q99571 388 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 ASCL3Q9NQ33 180 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 NAT8BQ9UHF3 227 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 DTX4Q9Y2E6 619 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 GFRA3O60609 400 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 P01737 135 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 PSG9Q00887 426 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 SLC35E4Q6ICL7 350 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 OR2V2Q96R30 315 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 FZR1Q9UM11 496 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 CASP8AP2Q9UKL3 1982 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 HYPMO75409 117 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 NTF3P20783 257 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 ZMIZ1Q9ULJ6 1067 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 IGHV3-64DA0A0J9YX35 117 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 TMEM183BQ1AE95 376 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 OR9G1Q8NH87 305 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 DYNLRB2Q8TF09 96 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 MS4A7Q9GZW8 240 aaPredicted RBP13.55□□□□□ -0.24
GNE-202ENST00000396594 IGLV3-32A0A0A0MS00 114 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 FBLL1A6NHQ2 334 aaKnown RBP13.55□□□□□ -0.24
GNE-202ENST00000396594 CLDN14O95500 239 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 CRISP2P16562 243 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 OR1B1Q8NGR6 318 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 OR2T10Q8NGZ9 312 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 MRPL30Q8TCC3 161 aaKnown RBP13.55□□□□□ -0.24
GNE-202ENST00000396594 AQP3Q92482 292 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 TMEM208Q9BTX3 173 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 MRPL32Q9BYC8 188 aaKnown RBP13.55□□□□□ -0.24
GNE-202ENST00000396594 TMEM222Q9H0R3 208 aa13.55□□□□□ -0.24
GNE-202ENST00000396594 MFSD2BA6NFX1 497 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 M0R143 59 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 POLR2GP62487 172 aaKnown RBP eCLIP13.54□□□□□ -0.24
GNE-202ENST00000396594 FAM210BQ96KR6 192 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 TMEM191AQ9H0A3 160 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 PARP12Q9H0J9 701 aaKnown RBP13.54□□□□□ -0.24
GNE-202ENST00000396594 FAM206AQ9NX38 181 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 A0A0G2JMZ2 1700 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 LRRC37A2A6NM11 1700 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 TRPM6Q9BX84 2022 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 C11orf94C9JXX5 98 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 B2MP61769 119 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 LAMTOR1Q6IAA8 161 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 PQLC2Q6ZP29 291 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 IGHV3-43A0A0B4J1X8 118 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 IGHV3-43DP0DP04 118 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 GLRXP35754 106 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 MGAT2Q10469 447 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 ZNF154Q13106 437 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 LBHQ53QV2 105 aaPredicted RBP13.54□□□□□ -0.24
GNE-202ENST00000396594 PPP1R32Q7Z5V6 425 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 PRSS3P2Q8NHM4 247 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 VAMP8Q9BV40 100 aa13.54□□□□□ -0.24
GNE-202ENST00000396594 LOC102723996A0A087X1L8 192 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 LINC00862A6NCI5 91 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 HBZP02008 142 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 HPXP02790 462 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 PATE4P0C8F1 98 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 CCL2P13500 99 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 FUT5Q11128 374 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 SYT8Q8NBV8 401 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 TRPM7Q96QT4 1865 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 TRAV8-7A0A075B6U6 113 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 SMPD2O60906 423 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 GGACTQ9BVM4 153 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 BMPR1BO00238 502 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 S1PR2O95136 353 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 MEF2CQ06413 473 aaPredicted RBP13.53□□□□□ -0.24
GNE-202ENST00000396594 MMDQ15546 238 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 OR4X1Q8NH49 305 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 OR4A5Q8NH83 315 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 OR10C1Q96KK4 312 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 HLA-DQB1P01920 261 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 LPAR5Q9H1C0 372 aa13.53□□□□□ -0.24
GNE-202ENST00000396594 GVQW1Q8N7I0 195 aa13.52□□□□□ -0.24
GNE-202ENST00000396594 SNRNP40Q96DI7 357 aaKnown RBP13.52□□□□□ -0.24
GNE-202ENST00000396594 PRSS50Q9UI38 385 aa13.52□□□□□ -0.24
GNE-202ENST00000396594 HSPB8Q9UJY1 196 aa13.52□□□□□ -0.24
GNE-202ENST00000396594 ARL2-SNX15V9GYD0 113 aa13.52□□□□□ -0.24
GNE-202ENST00000396594 BRCA1P38398 1863 aaKnown RBP13.52□□□□□ -0.24
GNE-202ENST00000396594 A0A1W2PQM1 296 aa13.52□□□□□ -0.24
GNE-202ENST00000396594 OR8I2Q8N0Y5 310 aa13.52□□□□□ -0.24
GNE-202ENST00000396594 COPS9Q8WXC6 57 aa13.52□□□□□ -0.24
GNE-202ENST00000396594 PPP1R3EQ9H7J1 279 aa13.52□□□□□ -0.24
GNE-202ENST00000396594 LSM11P83369 360 aaKnown RBP eCLIP13.52□□□□□ -0.25
GNE-202ENST00000396594 SLC25A33Q9BSK2 321 aa13.52□□□□□ -0.25
GNE-202ENST00000396594 GPR132Q9UNW8 380 aa13.52□□□□□ -0.25
GNE-202ENST00000396594 LIPFP07098 398 aa13.52□□□□□ -0.25
GNE-202ENST00000396594 APOBEC3AP31941 199 aaPredicted RBP13.52□□□□□ -0.25
GNE-202ENST00000396594 MEOX2P50222 304 aa13.52□□□□□ -0.25
GNE-202ENST00000396594 SPNS2Q8IVW8 549 aa13.52□□□□□ -0.25
GNE-202ENST00000396594 FADS6Q8N9I5 356 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms