RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 OR1S2Q8NGQ3 325 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 OR1L1Q8NH94 360 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 ERGIC1Q969X5 290 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 OR2V2Q96R30 315 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 PARP12Q9H0J9 701 aaKnown RBP12.55□□□□□ -0.4
CBX3-202ENST00000396386 ELOVL5Q9NYP7 299 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 NUP50Q9UKX7 468 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 ZNF835Q9Y2P0 537 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 HBZP02008 142 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 OR8U9P0C7N5 309 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 PSG2P11465 335 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 CFHR2P36980 270 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 TRAT1Q6PIZ9 186 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 CD177Q8N6Q3 437 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 OR8U1Q8NH10 309 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 C11orf1Q9H5F2 150 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 BORCS7-ASMTA0A0B4J1R7 106 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 RNF212BA8MTL3 300 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 CRYZL1O95825 349 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 CD40P25942 277 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 PRDX2P32119 198 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 TMPRSS3P57727 454 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 SELENOVP59797 346 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 PAX5Q02548 391 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 UBAC2Q8NBM4 344 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 RNASE11Q8TAA1 199 aaKnown RBP12.54□□□□□ -0.4
CBX3-202ENST00000396386 MRGPRDQ8TDS7 321 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 NINJ1Q92982 152 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 ARL11Q969Q4 196 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 PLEKHF2Q9H8W4 249 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 SEBOXQ9HB31 216 aaPredicted RBP12.54□□□□□ -0.4
CBX3-202ENST00000396386 LPAR3Q9UBY5 353 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 SH3BGRL2Q9UJC5 107 aa12.54□□□□□ -0.4
CBX3-202ENST00000396386 ZNF705EA8MWA4 302 aaPredicted RBP12.53□□□□□ -0.4
CBX3-202ENST00000396386 C16orf97H3BN30 126 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 LGALS8O00214 317 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 SPRY3O43610 288 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 SSSCA1O60232 199 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 SLC25A6P12236 298 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 POLR2GP62487 172 aaKnown RBP eCLIP12.53□□□□□ -0.4
CBX3-202ENST00000396386 VAMP2P63027 116 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 MOGAT3Q86VF5 341 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 DRAM1Q8N682 238 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 BOLLQ8N9W6 283 aaKnown RBP12.53□□□□□ -0.4
CBX3-202ENST00000396386 ITLN1Q8WWA0 313 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 LURAP1Q96LR2 239 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 MRPL37Q9BZE1 423 aaKnown RBP12.53□□□□□ -0.4
CBX3-202ENST00000396386 TOLLIPQ9H0E2 274 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 NARFLQ9H6Q4 476 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 RAB19A4D1S5 217 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 NUDT19A8MXV4 375 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 FAM157CP0CG43 387 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 MMP9P14780 707 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 GLIPR1P48060 266 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 EWSR1Q01844 656 aaKnown RBP eCLIP12.53□□□□□ -0.4
CBX3-202ENST00000396386 PRR30Q53SZ7 412 aaPredicted RBP12.53□□□□□ -0.4
CBX3-202ENST00000396386 UQCC3Q6UW78 93 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 OR2C3Q8N628 320 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 GCSAMQ8N6F7 178 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 ZNF645Q8N7E2 425 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 ZBTB34Q8NCN2 500 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 NUP37Q8NFH4 326 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 PPP1R35Q8TAP8 253 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 MARC2Q969Z3 335 aa12.53□□□□□ -0.4
CBX3-202ENST00000396386 SNRNP40Q96DI7 357 aaKnown RBP12.53□□□□□ -0.4
CBX3-202ENST00000396386 SAT2Q96F10 170 aaPredicted RBP12.53□□□□□ -0.4
CBX3-202ENST00000396386 BSCL2Q96G97 398 aaPredicted RBP12.53□□□□□ -0.4
CBX3-202ENST00000396386 IGKV1D-17A0A075B6S4 117 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 A0A1B0GU03 582 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 WRBO00258 174 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 ZNF737O75373 536 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 EPHA1P21709 976 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 SULT1A2P50226 295 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 CAV2P51636 162 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 RBPJQ06330 500 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 CXorf66Q5JRM2 361 aaPredicted RBP12.52□□□□□ -0.41
CBX3-202ENST00000396386 TMEM108Q6UXF1 575 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 CLEC9AQ6UXN8 241 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 C22orf34Q6ZV56 151 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 OR52L2PQ8NGH6 319 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 OR13A1Q8NGR1 328 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 OR2D2Q9H210 308 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 ARV1Q9H2C2 271 aa12.52□□□□□ -0.41
CBX3-202ENST00000396386 PRRC2CQ9Y520 2896 aaKnown RBP12.52□□□□□ -0.41
CBX3-202ENST00000396386 SPENQ96T58 3664 aaKnown RBP12.51□□□□□ -0.41
CBX3-202ENST00000396386 A0A0G2JRQ6 117 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 ZNF16P17020 682 aaPredicted RBP12.51□□□□□ -0.41
CBX3-202ENST00000396386 GATA4P43694 442 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 ID3Q02535 119 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 EDDM3AQ14507 147 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 MSMO1Q15800 293 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 SPRNQ5BIV9 151 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 SSX8Q7RTT4 187 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 WFDC8Q8IUA0 241 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 TPRX1Q8N7U7 411 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 LSM10Q969L4 123 aaKnown RBP12.51□□□□□ -0.41
CBX3-202ENST00000396386 GPR146Q96CH1 333 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 SNX22Q96L94 193 aa12.51□□□□□ -0.41
CBX3-202ENST00000396386 SLC25A31Q9H0C2 315 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms