RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 LUMP51884 338 aaPredicted RBP12.48□□□□□ -0.41
CCT4-201ENST00000394440 TFF3Q07654 80 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 EFNB3Q15768 340 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 IAH1Q2TAA2 248 aaPredicted RBP12.48□□□□□ -0.41
CCT4-201ENST00000394440 CR1LQ2VPA4 569 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 LYZL2Q7Z4W2 148 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 CMTM1Q8IZ96 169 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 KCNRGQ8N5I3 272 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 DCAF16Q9NXF7 216 aa12.48□□□□□ -0.41
CCT4-201ENST00000394440 C15orf65H3BRN8 121 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 HSPA12AO43301 675 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 OR2F2O95006 317 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 IFNA21P01568 189 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 SRPXP78539 464 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 OR2F1Q13607 317 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 RAB32Q13637 225 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 TRAT1Q6PIZ9 186 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 ZCCHC24Q8N2G6 241 aaKnown RBP12.47□□□□□ -0.41
CCT4-201ENST00000394440 ZNRF1Q8ND25 227 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 CA5BP1Q8WTZ4 195 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 GPHA2Q96T91 129 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 DNTTIP1Q9H147 329 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 ARID1AO14497 2285 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 KALRNO60229 2985 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 A0A0D9SG52 128 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 LOXP28300 417 aaPredicted RBP12.47□□□□□ -0.41
CCT4-201ENST00000394440 SSTR5P35346 364 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 CEACAM6P40199 344 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 MST1LQ2TV78 715 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 BEX5Q5H9J7 111 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 PRSS54Q6PEW0 395 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 ZNF843Q8N446 348 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 ZNF561Q8N587 486 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 LRRC46Q96FV0 321 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 AKR1E2Q96JD6 320 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 NCOR1P1Q9H4R4 102 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 KCNJ16Q9NPI9 418 aa12.47□□□□□ -0.41
CCT4-201ENST00000394440 ODAMA1E959 279 aa12.46□□□□□ -0.41
CCT4-201ENST00000394440 H0Y980 276 aa12.46□□□□□ -0.41
CCT4-201ENST00000394440 CDS2O95674 445 aa12.46□□□□□ -0.41
CCT4-201ENST00000394440 PLAUP00749 431 aa12.46□□□□□ -0.41
CCT4-201ENST00000394440 MUC1P15941 1255 aaPredicted RBP12.46□□□□□ -0.41
CCT4-201ENST00000394440 F2RP25116 425 aa12.46□□□□□ -0.41
CCT4-201ENST00000394440 IL2RGP31785 369 aa12.46□□□□□ -0.41
CCT4-201ENST00000394440 APOBEC3AP31941 199 aaPredicted RBP12.46□□□□□ -0.41
CCT4-201ENST00000394440 EXOSC2Q13868 293 aaKnown RBP12.46□□□□□ -0.41
CCT4-201ENST00000394440 ACOT7LQ6ZUV0 252 aa12.46□□□□□ -0.41
CCT4-201ENST00000394440 SLC7A5P1Q8MH63 180 aa12.46□□□□□ -0.41
CCT4-201ENST00000394440 SLC35G3Q8N808 338 aa12.46□□□□□ -0.41
CCT4-201ENST00000394440 FBXO9Q9UK97 447 aaPredicted RBP12.46□□□□□ -0.41
CCT4-201ENST00000394440 TMED3Q9Y3Q3 217 aa12.46□□□□□ -0.41
CCT4-201ENST00000394440 RNF115Q9Y4L5 304 aa12.46□□□□□ -0.41
CCT4-201ENST00000394440 EDDM3AQ14507 147 aa12.46□□□□□ -0.42
CCT4-201ENST00000394440 ZNF788Q6ZQV5 615 aa12.46□□□□□ -0.42
CCT4-201ENST00000394440 GAFA1Q96PS6 74 aa12.46□□□□□ -0.42
CCT4-201ENST00000394440 DCTN5Q9BTE1 182 aa12.46□□□□□ -0.42
CCT4-201ENST00000394440 OR5AC2Q9NZP5 309 aa12.46□□□□□ -0.42
CCT4-201ENST00000394440 RP2O75695 350 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 SELLP14151 372 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 P2RX3P56373 397 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 GNMTQ14749 295 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 TMEM268Q5VZI3 342 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 MEX3BQ6ZN04 569 aaKnown RBP12.45□□□□□ -0.42
CCT4-201ENST00000394440 OR52L2PQ8NGH6 319 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 SAP30LQ9HAJ7 183 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 GSKIPQ9P0R6 139 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 UBE2J1Q9Y385 318 aaPredicted RBP12.45□□□□□ -0.42
CCT4-201ENST00000394440 A0A1B0GW55 424 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 DEFB108AA8MXU0 73 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 TNFSF12O43508 249 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 OR8U9P0C7N5 309 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 DUX4L2P0CJ85 424 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 DUX4L3P0CJ86 424 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 DUX4L4P0CJ87 422 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 DUX4L5P0CJ88 424 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 DUX4L6P0CJ89 424 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 DUX4L7P0CJ90 424 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 IRF2P14316 349 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 HTR2BP41595 481 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 AP2S1P53680 142 aaPredicted RBP12.45□□□□□ -0.42
CCT4-201ENST00000394440 HTD2P86397 168 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 FAM53AQ6NSI3 398 aaPredicted RBP12.45□□□□□ -0.42
CCT4-201ENST00000394440 DUX4L9Q6RFH8 374 aaPredicted RBP12.45□□□□□ -0.42
CCT4-201ENST00000394440 SELENOHQ8IZQ5 122 aaKnown RBP12.45□□□□□ -0.42
CCT4-201ENST00000394440 OR5D13Q8NGL4 314 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 OR8U1Q8NH10 309 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 ARL11Q969Q4 196 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 RRNAD1Q96FB5 475 aaKnown RBP12.45□□□□□ -0.42
CCT4-201ENST00000394440 TMEM204Q9BSN7 226 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 DUX4Q9UBX2 424 aa12.45□□□□□ -0.42
CCT4-201ENST00000394440 DUXBA0A1W2PPF3 345 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 TUBAL3A6NHL2 446 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 B9A039 149 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 B3GALNT1O75752 331 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 IFNA7P01567 189 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 PET100P0DJ07 73 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 S100GP29377 79 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 FAM219AQ8IW50 185 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 DCUN1D4Q92564 292 aa12.44□□□□□ -0.42
CCT4-201ENST00000394440 IL22RA2Q969J5 263 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms