RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 SPTBN4Q9H254 2564 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 IGHV3-43A0A0B4J1X8 118 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 K7ENP7 123 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 PRRG2O14669 202 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 IGKV1-39P01597 117 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 IGKV1D-39P04432 117 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 IGHV3-43DP0DP04 118 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 SSTR5P35346 364 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 EDDM3AQ14507 147 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 NMSQ5H8A3 153 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 MOGAT3Q86VF5 341 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.64□□□□□ -0.39
GPC3-202ENST00000394299 PLPPR2Q96GM1 343 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 MRPL37Q9BZE1 423 aaKnown RBP12.64□□□□□ -0.39
GPC3-202ENST00000394299 TMEM30CPA0ZSE6 113 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 ATXN7O15265 892 aaPredicted RBP12.63□□□□□ -0.39
GPC3-202ENST00000394299 IGHV3-13P01766 116 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 TUBG1P23258 451 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 GLRXP35754 106 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 NKX2-1P43699 371 aaPredicted RBP12.63□□□□□ -0.39
GPC3-202ENST00000394299 ID4P47928 161 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 LINC00205P59089 165 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 SRSF3P84103 164 aaKnown RBP12.63□□□□□ -0.39
GPC3-202ENST00000394299 LTC4SQ16873 150 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 Q6ZRM9 215 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 OR13A1Q8NGR1 328 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 TUBG2Q9NRH3 451 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 RFNGQ9Y644 331 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 POMT1Q9Y6A1 747 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 DEFB108AA8MXU0 73 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 H0Y980 276 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 SSSCA1O60232 199 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 TMEM50AO95807 157 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 HBZP02008 142 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 OMGP23515 440 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 PRDX2P32119 198 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 KLF3P57682 345 aaPredicted RBP12.63□□□□□ -0.39
GPC3-202ENST00000394299 KRBOX4Q5JUW0 171 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 MOB1BQ7L9L4 216 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 TGIF2LYQ8IUE0 185 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 GCSAMQ8N6F7 178 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 ITLN1Q8WWA0 313 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 GPR146Q96CH1 333 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 PLEKHA2Q9HB19 425 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 GLS2Q9UI32 602 aa12.63□□□□□ -0.39
GPC3-202ENST00000394299 IGKV1D-17A0A075B6S4 117 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 A0A1B0GWJ7 208 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 ZNF705EA8MWA4 302 aaPredicted RBP12.62□□□□□ -0.39
GPC3-202ENST00000394299 NPIPB11E5RHQ5 1161 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 ZP3P21754 424 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 VDAC1P21796 283 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 SRPXP78539 464 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 NHLH1Q02575 133 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 MST1LQ2TV78 715 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 EIF2S3LQ2VIR3 472 aaKnown RBP12.62□□□□□ -0.39
GPC3-202ENST00000394299 DRAM1Q8N682 238 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 OR5D13Q8NGL4 314 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 RNF141Q8WVD5 230 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 C5orf30Q96GV9 206 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 KCNIP1Q9NZI2 227 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 SESN1Q9Y6P5 492 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 SERPINE2P07093 398 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 IL2RGP31785 369 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 PPP1CCP36873 323 aaKnown RBP12.62□□□□□ -0.39
GPC3-202ENST00000394299 CAV2P51636 162 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 SMIM21Q3B7S5 101 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 ZNF585BQ52M93 769 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 SLC35E4Q6ICL7 350 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 ZNF808Q8N4W9 903 aaPredicted RBP12.62□□□□□ -0.39
GPC3-202ENST00000394299 ZNRF1Q8ND25 227 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 BPIFCQ8NFQ6 507 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 GALMQ96C23 342 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 C11orf1Q9H5F2 150 aa12.62□□□□□ -0.39
GPC3-202ENST00000394299 IGSF23A1L1A6 192 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 B8ZZF3 427 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 TAAR5O14804 337 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 GPR137BO60478 399 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 SELLP14151 372 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 CD40P25942 277 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 OR2B11Q5JQS5 317 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 WFDC8Q8IUA0 241 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 ZCCHC24Q8N2G6 241 aaKnown RBP12.61□□□□□ -0.39
GPC3-202ENST00000394299 MEGF10Q96KG7 1140 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 DNTTIP1Q9H147 329 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 HRH4Q9H3N8 390 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 MED19A0JLT2 244 aaPredicted RBP12.61□□□□□ -0.39
GPC3-202ENST00000394299 GFRA3O60609 400 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 IGHV3-7P01780 117 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 CD200P41217 278 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 LPAR6P43657 344 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 P2RY1P47900 373 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 ODF3L1Q8IXM7 274 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 EIF4E3Q8N5X7 224 aaKnown RBP12.61□□□□□ -0.39
GPC3-202ENST00000394299 PRR7Q8TB68 274 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 MARC2Q969Z3 335 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 TMEM231Q9H6L2 316 aa12.61□□□□□ -0.39
GPC3-202ENST00000394299 A0A1B0GW55 424 aa12.6□□□□□ -0.39
GPC3-202ENST00000394299 SRRM5B3KS81 715 aa12.6□□□□□ -0.39
GPC3-202ENST00000394299 CHST1O43916 411 aa12.6□□□□□ -0.39
GPC3-202ENST00000394299 DUX4L2P0CJ85 424 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms