RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 ATF4P18848 351 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-202ENST00000390009 VDAC1P21796 283 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 PRDX2P32119 198 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 SELENOVP59797 346 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 NMSQ5H8A3 153 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 TMEM108Q6UXF1 575 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 MOGAT3Q86VF5 341 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 GCSAMQ8N6F7 178 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 IL22RA2Q969J5 263 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 AKR1E2Q96JD6 320 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 DUX4Q9UBX2 424 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 KCNS2Q9ULS6 477 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 POMT1Q9Y6A1 747 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 ADAM20O43506 726 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 WNT2P09544 360 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 OR8U9P0C7N5 309 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 GLIPR1P48060 266 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 UCNP55089 124 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 RPL7L1Q6DKI1 246 aaKnown RBP15.25■□□□□ 0.03
ACTN4-202ENST00000390009 BOLLQ8N9W6 283 aaKnown RBP15.25■□□□□ 0.03
ACTN4-202ENST00000390009 OR8U1Q8NH10 309 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 MRGPRDQ8TDS7 321 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 ITLN1Q8WWA0 313 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 BARX1Q9HBU1 254 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-202ENST00000390009 FBXL17Q9UF56 701 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 PPP1R3CQ9UQK1 317 aa15.25■□□□□ 0.03
ACTN4-202ENST00000390009 TLN1Q9Y490 2541 aaKnown RBP15.24■□□□□ 0.03
ACTN4-202ENST00000390009 IGKV1D-17A0A075B6S4 117 aa15.24■□□□□ 0.03
ACTN4-202ENST00000390009 HBZP02008 142 aa15.24■□□□□ 0.03
ACTN4-202ENST00000390009 IL2RGP31785 369 aa15.24■□□□□ 0.03
ACTN4-202ENST00000390009 TMEM33P57088 247 aa15.24■□□□□ 0.03
ACTN4-202ENST00000390009 RBPJQ06330 500 aa15.24■□□□□ 0.03
ACTN4-202ENST00000390009 FAM90A1Q86YD7 464 aa15.24■□□□□ 0.03
ACTN4-202ENST00000390009 WFDC8Q8IUA0 241 aa15.24■□□□□ 0.03
ACTN4-202ENST00000390009 TPRX1Q8N7U7 411 aa15.24■□□□□ 0.03
ACTN4-202ENST00000390009 TMED6Q8WW62 240 aa15.24■□□□□ 0.03
ACTN4-202ENST00000390009 ZDHHC8Q9ULC8 765 aa15.24■□□□□ 0.03
ACTN4-202ENST00000390009 RCL1Q9Y2P8 373 aaKnown RBP15.24■□□□□ 0.03
ACTN4-202ENST00000390009 CLEC18AA5D8T8 446 aa15.23■□□□□ 0.03
ACTN4-202ENST00000390009 CLEC18CQ8NCF0 446 aa15.23■□□□□ 0.03
ACTN4-202ENST00000390009 NUP37Q8NFH4 326 aa15.23■□□□□ 0.03
ACTN4-202ENST00000390009 DMBX1Q8NFW5 382 aa15.23■□□□□ 0.03
ACTN4-202ENST00000390009 SESN1Q9Y6P5 492 aa15.23■□□□□ 0.03
ACTN4-202ENST00000390009 ZNF737O75373 536 aa15.23■□□□□ 0.03
ACTN4-202ENST00000390009 SERPINE2P07093 398 aa15.23■□□□□ 0.03
ACTN4-202ENST00000390009 PTAFRP25105 342 aa15.23■□□□□ 0.03
ACTN4-202ENST00000390009 NKX2-1P43699 371 aaPredicted RBP15.23■□□□□ 0.03
ACTN4-202ENST00000390009 P2RY1P47900 373 aa15.23■□□□□ 0.03
ACTN4-202ENST00000390009 EIF5AP63241 154 aaKnown RBP15.23■□□□□ 0.03
ACTN4-202ENST00000390009 PAX5Q02548 391 aa15.23■□□□□ 0.03
ACTN4-202ENST00000390009 GNMTQ14749 295 aa15.23■□□□□ 0.03
ACTN4-202ENST00000390009 HSD17B13Q7Z5P4 300 aaPredicted RBP15.23■□□□□ 0.03
ACTN4-202ENST00000390009 TSPAN4O14817 238 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 FGF2P09038 288 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 ZP3P21754 424 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 DRAM1Q8N682 238 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 OR52L2PQ8NGH6 319 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 OR13A1Q8NGR1 328 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 ERGIC1Q969X5 290 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 LURAP1Q96LR2 239 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 AIFM2Q9BRQ8 373 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 SMIM3Q9BZL3 60 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 IGF2RP11717 2491 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 DSCAMO60469 2012 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 IGHV3OR15-7A0A075B7D8 119 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 ABCD4O14678 606 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 FGF16O43320 207 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 GPR137BO60478 399 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 TSPAN9O75954 239 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 LHBP01229 141 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 GATA4P43694 442 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 GPR157Q5UAW9 335 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 CLEC9AQ6UXN8 241 aa15.22■□□□□ 0.03
ACTN4-202ENST00000390009 PIGBOS1A0A0B4J2F0 54 aa15.21■□□□□ 0.03
ACTN4-202ENST00000390009 A8MXK9 166 aa15.21■□□□□ 0.03
ACTN4-202ENST00000390009 IGHV1-46P01743 117 aa15.21■□□□□ 0.03
ACTN4-202ENST00000390009 GAPDHP04406 335 aaKnown RBP15.21■□□□□ 0.03
ACTN4-202ENST00000390009 THBDP07204 575 aa15.21■□□□□ 0.03
ACTN4-202ENST00000390009 SSTR5P35346 364 aa15.21■□□□□ 0.03
ACTN4-202ENST00000390009 POLR2GP62487 172 aaKnown RBP eCLIP15.21■□□□□ 0.03
ACTN4-202ENST00000390009 EDDM3AQ14507 147 aa15.21■□□□□ 0.03
ACTN4-202ENST00000390009 FAM53AQ6NSI3 398 aaPredicted RBP15.21■□□□□ 0.03
ACTN4-202ENST00000390009 EIF4E3Q8N5X7 224 aaKnown RBP15.21■□□□□ 0.03
ACTN4-202ENST00000390009 RNF141Q8WVD5 230 aa15.21■□□□□ 0.03
ACTN4-202ENST00000390009 RND1Q92730 232 aa15.21■□□□□ 0.03
ACTN4-202ENST00000390009 SEBOXQ9HB31 216 aaPredicted RBP15.21■□□□□ 0.03
ACTN4-202ENST00000390009 LIN7CQ9NUP9 197 aaKnown RBP15.21■□□□□ 0.03
ACTN4-202ENST00000390009 DPRXA6NFQ7 191 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 JTBO76095 146 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 TNFAIP6P98066 277 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-202ENST00000390009 CXorf66Q5JRM2 361 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-202ENST00000390009 FAM122CQ6P4D5 195 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 ZNF645Q8N7E2 425 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 NINJ1Q92982 152 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 BSCL2Q96G97 398 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-202ENST00000390009 ABHD14BQ96IU4 210 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 LINC00052Q96N35 136 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 TOLLIPQ9H0E2 274 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 C11orf1Q9H5F2 150 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 IL19Q9UHD0 177 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms