RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 SRD5A3Q9H8P0 318 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 WFDC1Q9HC57 220 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 ESPL1Q14674 2120 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 CTXND1A0A1B0GTU2 59 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 TOX4O94842 621 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 MPLP40238 635 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 CAMPP49913 170 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 UBE2G1P62253 170 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 FAM166AQ6J272 317 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 GUSBP11Q6P575 273 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 CXorf67Q86X51 503 aaPredicted RBP12.34□□□□□ -0.43
RTF1-201ENST00000389629 HIST3H2BBQ8N257 126 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 OR2V1Q8NHB1 315 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 C10orf35Q96D05 121 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 A0A0U1RQV5 110 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 MST1LQ2TV78 715 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 C22orf15Q8WYQ4 148 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 ANGPTL4Q9BY76 406 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 IGHV3-13P01766 116 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 IGHV3-7P01780 117 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 GNG4P50150 75 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 FNDC7Q5VTL7 733 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 OR2D2Q9H210 308 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 DUSP13Q9UII6 198 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 ANAPC1Q9H1A4 1944 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 LOC102723971A0A1B0GUV8 181 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 IRF2P14316 349 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 CA6P23280 308 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 SUPT4H1P63272 117 aaKnown RBP12.34□□□□□ -0.43
RTF1-201ENST00000389629 RPEL1Q2QD12 228 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 BTNL3Q6UXE8 466 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 OR4X1Q8NH49 305 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 SSMEM1Q8WWF3 244 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 MOB3AQ96BX8 217 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 VWCEQ96DN2 955 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 RBM14Q96PK6 669 aaKnown RBP12.34□□□□□ -0.43
RTF1-201ENST00000389629 OR4C12Q96R67 309 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 CLN8Q9UBY8 286 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 POLDIP2Q9Y2S7 368 aa12.34□□□□□ -0.43
RTF1-201ENST00000389629 STUMQ69YW2 141 aa12.33□□□□□ -0.43
RTF1-201ENST00000389629 ZNF391Q9UJN7 358 aa12.33□□□□□ -0.43
RTF1-201ENST00000389629 R4GN57 208 aa12.33□□□□□ -0.43
RTF1-201ENST00000389629 IGHV3-43A0A0B4J1X8 118 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 A0A1B0GU03 582 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 IGHV3-43DP0DP04 118 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 ERVFRD-1P60508 538 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 SNAI3Q3KNW1 292 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 VHLLQ6RSH7 139 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 PLA2G3Q9NZ20 509 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 TRBV6-7A0A0A0MS04 114 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 LOC390937A0A1W2PQ73 354 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 RAC1P63000 192 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 SERF2P84101 59 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 KCNE4Q8WWG9 221 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 PARLQ9H300 379 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 HEATR5AQ86XA9 2040 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 A0A0A6YYD4 124 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 F2RP25116 425 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 NXPH1P58417 271 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 CDCP2Q5VXM1 449 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 Q96M66 194 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 ZNF488Q96MN9 340 aa12.33□□□□□ -0.44
RTF1-201ENST00000389629 CISD1Q9NZ45 108 aaKnown RBP12.33□□□□□ -0.44
RTF1-201ENST00000389629 IGHV2-70P01814 119 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 CSRP2Q16527 193 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 SELENOHQ8IZQ5 122 aaKnown RBP12.32□□□□□ -0.44
RTF1-201ENST00000389629 FOXD3Q9UJU5 478 aaPredicted RBP12.32□□□□□ -0.44
RTF1-201ENST00000389629 NGFP01138 241 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 G6PCP35575 357 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 APOBEC3DQ96AK3 386 aaPredicted RBP12.32□□□□□ -0.44
RTF1-201ENST00000389629 CHEK1O14757 476 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 RBM11P57052 281 aaKnown RBP12.32□□□□□ -0.44
RTF1-201ENST00000389629 IFI44Q8TCB0 444 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 FOXJ2Q9P0K8 574 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 OR2W1Q9Y3N9 320 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 LDLRAD4O15165 306 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 OR5G3P0C626 314 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 CCL3P10147 92 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 GNG3P63215 75 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 ICAM4Q14773 271 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 P2RY6Q15077 328 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 OR10D3Q8NH80 312 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 GPR146Q96CH1 333 aa12.32□□□□□ -0.44
RTF1-201ENST00000389629 WDR61Q9GZS3 305 aaKnown RBP12.32□□□□□ -0.44
RTF1-201ENST00000389629 DUSP15Q9H1R2 295 aaPredicted RBP12.32□□□□□ -0.44
RTF1-201ENST00000389629 IGKV1D-8A0A087WSZ0 117 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 FCGR3BO75015 233 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 FGF5P12034 268 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 Q56UQ5 140 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 CFHR5Q9BXR6 569 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 A0A087WWC5 75 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 RNF144BQ7Z419 303 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 RCC1LQ96I51 464 aaKnown RBP12.31□□□□□ -0.44
RTF1-201ENST00000389629 PSG11Q9UQ72 335 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 ASXL3Q9C0F0 2248 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 RPL36A-HNRNPH2H7BZ11 118 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 SCGB2A2Q13296 93 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 ABLIM2Q6H8Q1 611 aa12.31□□□□□ -0.44
RTF1-201ENST00000389629 CISD2Q8N5K1 135 aaKnown RBP12.31□□□□□ -0.44
RTF1-201ENST00000389629 LRFN3Q9BTN0 628 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms