RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 DGAT2Q96PD7 388 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 AMELYQ99218 206 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 TM2D1Q9BX74 207 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 PRTFDC1Q9NRG1 225 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 DHDHQ9UQ10 334 aa6.44□□□□□ -1.38
CDKL5-201ENST00000379989 PHF3Q92576 2039 aaKnown RBP6.43□□□□□ -1.38
CDKL5-201ENST00000379989 IGSF23A1L1A6 192 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 C19orf67A6NJJ6 358 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 TNFSF12O43508 249 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 PITX3O75364 302 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 KBTBD11O94819 623 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 BRI3O95415 125 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 EML2O95834 649 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 C8orf89P0DMQ9 161 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 SFTPDP35247 375 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 MLF1P58340 268 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 KCNIP4Q6PIL6 250 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 DPY19L4Q7Z388 723 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 OR2M3Q8NG83 312 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 SLC25A44Q96H78 314 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-201ENST00000379989 OR51B2Q9Y5P1 312 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 MPDZO75970 2070 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 SPAARA0A1B0GVQ0 90 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 HS3ST1O14792 307 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 GPX1P07203 203 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 FSTP19883 344 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 ZP4Q12836 540 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 GNMTQ14749 295 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 MRPL2Q5T653 305 aaKnown RBP6.43□□□□□ -1.38
CDKL5-201ENST00000379989 ZNF787Q6DD87 383 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 NEGR1Q7Z3B1 354 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 SIGLECL1Q8N7X8 197 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 SLC16A11Q8NCK7 471 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 PLPPR1Q8TBJ4 325 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 TP73-AS1Q9UF72 201 aa6.43□□□□□ -1.38
CDKL5-201ENST00000379989 TMEM150CB9EJG8 249 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 ZNF253O75346 499 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 HAND1O96004 215 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 OMGP23515 440 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 CEBPDP49716 269 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-201ENST00000379989 QRFPP83859 136 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 TRMT12Q53H54 448 aaKnown RBP6.42□□□□□ -1.38
CDKL5-201ENST00000379989 EMC4Q5J8M3 183 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 PHYHD1Q5SRE7 291 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 CDCP2Q5VXM1 449 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 UFSP1Q6NVU6 142 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 USP34Q70CQ2 3546 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 CACNG8Q8WXS5 425 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 NEUROG1Q92886 237 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 SPSB1Q96BD6 273 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 SIGMAR1Q99720 223 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 NRN1Q9NPD7 142 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 THYN1Q9P016 225 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 KIAA1549Q9HCM3 1950 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 H0Y8X5 98 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 J3QR06 171 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 ST8SIA3O43173 380 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 HCRTR1O43613 425 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 OR10J4P0C629 311 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 CRISP2P16562 243 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 TMEM267Q0VDI3 215 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-201ENST00000379989 CD226Q15762 336 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 LINC00114Q6XXX2 140 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 WDR5BQ86VZ2 330 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 OR2C3Q8N628 320 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 GNPNAT1Q96EK6 184 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-201ENST00000379989 VSTM2LQ96N03 204 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 RANBP2P49792 3224 aaKnown RBP6.42□□□□□ -1.38
CDKL5-201ENST00000379989 MUC21A0A0G2JKD1 596 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 MUC21A0A140T8X8 626 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 DUXBA0A1W2PPF3 345 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 FRG2CA6NGY1 282 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 TLX3O43711 291 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-201ENST00000379989 HPNP05981 417 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 VSIG8P0DPA2 414 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 YPEL3P61236 119 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-201ENST00000379989 HIST3H3Q16695 136 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 MUC21Q5SSG8 566 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 BVES-AS1Q5T3Y7 98 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 PEAR1Q5VY43 1037 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-201ENST00000379989 LCN15Q6UWW0 184 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 LYZL2Q7Z4W2 148 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 LGI3Q8N145 548 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 DAZLQ92904 295 aaKnown RBP6.42□□□□□ -1.38
CDKL5-201ENST00000379989 GPX7Q96SL4 187 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-201ENST00000379989 C11orf1Q9H5F2 150 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 ZDHHC11Q9H8X9 412 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 WDR76Q9H967 626 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 SELENOKQ9Y6D0 94 aa6.42□□□□□ -1.38
CDKL5-201ENST00000379989 ARHGAP21Q5T5U3 1957 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 A0A0B4J2E0 115 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 A0A1B0GX12 115 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 DPRXA6NFQ7 191 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 CRYM-AS1A6NIL9 109 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 RAD51DO75771 328 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 C3orf79P0CE67 100 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 FKBP2P26885 142 aaKnown RBP6.41□□□□□ -1.38
CDKL5-201ENST00000379989 SUMO3P55854 103 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-201ENST00000379989 ZNF726P1Q15940 193 aa6.41□□□□□ -1.38
CDKL5-201ENST00000379989 TMEM177Q53S58 311 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms