RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 NPVFQ9HCQ7 196 aa7.72□□□□□ -1.17
LIG3-202ENST00000378526 BCL2L10Q9HD36 194 aa7.72□□□□□ -1.17
LIG3-202ENST00000378526 KLRC4-KLRK1H3BQV0 150 aa7.71□□□□□ -1.17
LIG3-202ENST00000378526 ASAH2BP0C7U1 165 aa7.71□□□□□ -1.17
LIG3-202ENST00000378526 OCIAD2Q56VL3 154 aa7.71□□□□□ -1.17
LIG3-202ENST00000378526 NT5CQ8TCD5 201 aa7.71□□□□□ -1.17
LIG3-202ENST00000378526 ORAI1Q96D31 301 aa7.71□□□□□ -1.17
LIG3-202ENST00000378526 DNAJC30Q96LL9 226 aa7.71□□□□□ -1.17
LIG3-202ENST00000378526 TAAR2Q9P1P5 351 aa7.71□□□□□ -1.17
LIG3-202ENST00000378526 ISXQ2M1V0 245 aa7.71□□□□□ -1.17
LIG3-202ENST00000378526 SPACA5Q96QH8 159 aa7.71□□□□□ -1.17
LIG3-202ENST00000378526 GNB2P62879 340 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 SPSB4Q96A44 273 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 TOX2Q96NM4 488 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 WDR54Q9H977 334 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 FAM186AA6NE01 2351 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 A0A0G2JLM5 398 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 PLAUP00749 431 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 C1SP09871 688 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 SRD5A2P31213 254 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 HSPE1P61604 102 aaKnown RBP7.71□□□□□ -1.18
LIG3-202ENST00000378526 TMEM170BQ5T4T1 132 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 TMEM78Q5T7P6 136 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 HDGFL3Q9Y3E1 203 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 BCL9LQ86UU0 1499 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 UPK1AO00322 258 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 PCMT1P22061 227 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 FAM27D1Q5T7N8 215 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 ZNF479Q96JC4 524 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 HIGD1AQ9Y241 93 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 LRP12Q9Y561 859 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 SUMO2P61956 95 aaKnown RBP7.71□□□□□ -1.18
LIG3-202ENST00000378526 KLF9Q13886 244 aaPredicted RBP7.71□□□□□ -1.18
LIG3-202ENST00000378526 C12orf73Q69YU5 71 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 TMEM126AQ9H061 195 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 INSL6Q9Y581 213 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 UBR2Q8IWV8 1755 aa7.71□□□□□ -1.18
LIG3-202ENST00000378526 HOXC13P31276 330 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 SMAD2Q15796 467 aaKnown RBP7.7□□□□□ -1.18
LIG3-202ENST00000378526 FAM110CQ1W6H9 321 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 TMEM177Q53S58 311 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 OR1L8Q8NGR8 309 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 PGLYRP4Q96LB8 373 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 POLEQ07864 2286 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 MED1Q15648 1581 aaPredicted RBP7.7□□□□□ -1.18
LIG3-202ENST00000378526 ASIPP42127 132 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 Q6AWC8 147 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 ZNF660Q6AZW8 331 aaPredicted RBP7.7□□□□□ -1.18
LIG3-202ENST00000378526 OLIG3Q7RTU3 272 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 RNF182Q8N6D2 247 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 STPG3Q8N7X2 389 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 NAT6Q93015 286 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 A0A1B0GTH9 108 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 ADM5C9JUS6 153 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 ERVH48-1M5A8F1 160 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 GJB5O95377 273 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 SOD2P04179 222 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 TNFRSF1AP19438 455 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 ZNF117Q03924 483 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 DACT2Q5SW24 774 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 AMER3Q8N944 861 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 NPDC1Q9NQX5 325 aaPredicted RBP7.7□□□□□ -1.18
LIG3-202ENST00000378526 A0A0U1RQF3 1178 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 DEFB110Q30KQ9 67 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 NPEPL1Q8NDH3 523 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 SDF2Q99470 211 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 PPIAL4EA0A075B759 164 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 H0YGG7 62 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 PPIAL4FP0DN26 164 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 GGTLC2Q14390 218 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 SLCO4C1Q6ZQN7 724 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 Q6ZSR9 355 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 OR10J6PQ8NGY7 276 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 PPIAL4AQ9Y536 164 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 DANCRP0C864 163 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 MESTQ5EB52 335 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 DCAF10Q5QP82 559 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 NHP2Q9NX24 153 aaKnown RBP7.7□□□□□ -1.18
LIG3-202ENST00000378526 ALPK2Q86TB3 2170 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 LINC01549A6NIU2 74 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 PLPP1O14494 284 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 MLNRO43193 412 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 CA7P43166 264 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 PSG9Q00887 426 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 MARCH3Q86UD3 253 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 SSMEM1Q8WWF3 244 aa7.7□□□□□ -1.18
LIG3-202ENST00000378526 NGFP01138 241 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 SPRED2Q7Z698 418 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 WDYHV1Q96HA8 205 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 IMMP2LQ96T52 175 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 EPDR1Q9UM22 224 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 PPT2Q9UMR5 302 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 CLDN10P78369 228 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 PAQR9Q6ZVX9 377 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 MS4A4AQ96JQ5 239 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 H7C1H1 209 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 ICOSLGO75144 302 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 TCTN3Q6NUS6 607 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 LTB4R2Q9NPC1 389 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 TARBP1Q13395 1621 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms