RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 DEFA6Q01524 100 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 ZNF816Q0VGE8 651 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 GNMTQ14749 295 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 SSX1Q16384 188 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 TMEM30BQ3MIR4 351 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 KHDC1LQ5JSQ8 128 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 C5orf24Q7Z6I8 188 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 LINC00311Q8N616 119 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 OR51D1Q8NGF3 324 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 IL1F10Q8WWZ1 152 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 CFHR4Q92496 578 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 GFI1Q99684 422 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 CITED2Q99967 270 aaPredicted RBP9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 TM2D1Q9BX74 207 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 ABRACLQ9P1F3 81 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 V9GY05 133 aa9.23□□□□□ -0.93
SMARCE1-203ENST00000377808 MGAM2Q2M2H8 2515 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 A0A0A6YYD4 124 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 NCBP2LA6PVI3 153 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 PDCD5O14737 125 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 SOCS1O15524 211 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 PPP1CCP36873 323 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 EMX1Q04741 257 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 OR2W3Q7Z3T1 314 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 THNSL2Q86YJ6 484 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 C1QL4Q86Z23 238 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 TGIF2LXQ8IUE1 241 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 GAPTQ8N292 157 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 OR5AU1Q8NGC0 362 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 RTN4IP1Q8WWV3 396 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 FAM3DQ96BQ1 224 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 GALMQ96C23 342 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 R3HDM4Q96D70 268 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 ABHD14AQ9BUJ0 271 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 WNT10AQ9GZT5 417 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 LPAR5Q9H1C0 372 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 MBNL3Q9NUK0 354 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 NDUFB11Q9NX14 153 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 JPT1Q9UK76 154 aa9.22□□□□□ -0.93
SMARCE1-203ENST00000377808 FAM90A9PA6NNJ1 464 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 RGS11O94810 467 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 RANBP1P43487 201 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 VEGFCP49767 419 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 PSMD7P51665 324 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 ZNF134P52741 427 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 OR10A3P58181 314 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 QRFPP83859 136 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 Q3ZCU0 254 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 CT45A1Q5HYN5 189 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 C22orf42Q6IC83 251 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 SLC25A48Q6ZT89 311 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 NDUFA11Q86Y39 141 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 C5orf56Q8N8D9 126 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 C8orf31Q8N9H6 132 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 OR4X2Q8NGF9 303 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 OR2T10Q8NGZ9 312 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 CT45A3Q8NHU0 189 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 HDHD3Q9BSH5 251 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 STEAP1Q9UHE8 339 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 AK3Q9UIJ7 227 aa9.21□□□□□ -0.94
SMARCE1-203ENST00000377808 TMEM272A0A1B0GTI8 110 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 TCRBV4S1A1TA0A5B7 111 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 SMIM30A4D0T7 59 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 SERPINE3A8MV23 424 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 TXNL1O43396 289 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 WIPF1O43516 503 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 DENRO43583 198 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 MRPS14O60783 128 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 AMY1AP04745 511 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 AMY2AP04746 511 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 PF4V1P10720 104 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 MRPS15P82914 257 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 HMGN3Q15651 99 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 C2orf76Q3KRA6 126 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 MORN2Q502X0 79 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 ZNF554Q86TJ5 538 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 SPARTQ8N0X7 666 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 ZNF439Q8NDP4 499 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 OR2AK2Q8NG84 335 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 OR4F17Q8NGA8 305 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 RBMXL1Q96E39 390 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 ARHGAP5-AS1Q96IT6 56 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 EAF1Q96JC9 268 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 OR4F4Q96R69 305 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 LINC00527Q9UJ94 153 aa9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 RRP15Q9Y3B9 282 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-203ENST00000377808 WNK1Q9H4A3 2382 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 A0A075B6Q4 140 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 TRDV1A0A1B0GX56 115 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 PSMB11A5LHX3 300 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 ZNF736B4DX44 427 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 ST8SIA5O15466 376 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 HSPA12AO43301 675 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 FGF16O43320 207 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 KCNAB3O43448 404 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 MOSP00540 346 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 OPN1MWP04001 364 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 OPN1MW2P0DN77 364 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 OPN1MW3P0DN78 364 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 CD37P11049 281 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms