RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 FGF16O43320 207 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 AMY1AP04745 511 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 AMY2AP04746 511 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 REG1BP48304 166 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 PSMD7P51665 324 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 QRFPP83859 136 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 EMX1Q04741 257 aaPredicted RBP13.4□□□□□ -0.26
HMGN4-201ENST00000377575 P2RY14Q15391 338 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 NSUN5P1Q3KNT7 163 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 C9orf152Q5JTZ5 239 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 C6orf201Q7Z4U5 140 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 IZUMO1Q8IYV9 350 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 SVOPQ8N4V2 548 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 ZNF439Q8NDP4 499 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 RTN4IP1Q8WWV3 396 aaPredicted RBP13.4□□□□□ -0.26
HMGN4-201ENST00000377575 GFI1Q99684 422 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 NICN1Q9BSH3 213 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 OR2S2Q9NQN1 319 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 NDUFB11Q9NX14 153 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 JPT1Q9UK76 154 aa13.4□□□□□ -0.26
HMGN4-201ENST00000377575 RGS11O94810 467 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 BLVRBP30043 206 aaPredicted RBP13.39□□□□□ -0.27
HMGN4-201ENST00000377575 ZNF137PP52743 207 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 STEAP3Q658P3 488 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 HIST2H2BDQ6DRA6 164 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 MOB1BQ7L9L4 216 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 CENPVQ7Z7K6 275 aaPredicted RBP13.39□□□□□ -0.27
HMGN4-201ENST00000377575 C5orf56Q8N8D9 126 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 OR5AU1Q8NGC0 362 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 OR4X2Q8NGF9 303 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 GALMQ96C23 342 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 CITED2Q99967 270 aaPredicted RBP13.39□□□□□ -0.27
HMGN4-201ENST00000377575 FAAP24Q9BTP7 215 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 CHMP1AQ9HD42 196 aaPredicted RBP13.39□□□□□ -0.27
HMGN4-201ENST00000377575 PLEKHJ1Q9NW61 149 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 ABRACLQ9P1F3 81 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 LRRC42Q9Y546 428 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 V9GY05 133 aa13.39□□□□□ -0.27
HMGN4-201ENST00000377575 SH2D7A6NKC9 451 aaPredicted RBP13.38□□□□□ -0.27
HMGN4-201ENST00000377575 PDCD5O14737 125 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 SLC31A2O15432 143 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 OPN1MWP04001 364 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 OPN1MW2P0DN77 364 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 OPN1MW3P0DN78 364 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 MYL9P24844 172 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 HTD2P86397 168 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 DEFA6Q01524 100 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 EBI3Q14213 229 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 HNF4GQ14541 408 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 SSX1Q16384 188 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 FAM53AQ6NSI3 398 aaPredicted RBP13.38□□□□□ -0.27
HMGN4-201ENST00000377575 TGIF2LXQ8IUE1 241 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 LYG1Q8N1E2 194 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 OR4F17Q8NGA8 305 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 ST6GALNAC6Q969X2 333 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 OR4F4Q96R69 305 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 ABHD14AQ9BUJ0 271 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 LPAR5Q9H1C0 372 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 RIMS4Q9H426 269 aaPredicted RBP13.38□□□□□ -0.27
HMGN4-201ENST00000377575 NOTCH1P46531 2555 aa13.38□□□□□ -0.27
HMGN4-201ENST00000377575 A0A0A6YYD4 124 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 IGHV3-72A0A0B4J1Y9 119 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 WIPF1O43516 503 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 DENRO43583 198 aaKnown RBP13.37□□□□□ -0.27
HMGN4-201ENST00000377575 CD1BP29016 333 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 HMGN3Q15651 99 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 MORN2Q502X0 79 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 CT45A1Q5HYN5 189 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 OR2T10Q8NGZ9 312 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 CT45A3Q8NHU0 189 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 CYYR1Q96J86 154 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 STEAP1Q9UHE8 339 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 PLXNB1O43157 2135 aa13.37□□□□□ -0.27
HMGN4-201ENST00000377575 TRAV1-2A0A0B4J238 106 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 YPEL1O60688 119 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 NAPSAO96009 420 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 PPP1CCP36873 323 aaKnown RBP13.36□□□□□ -0.27
HMGN4-201ENST00000377575 ZNF134P52741 427 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 CD83Q01151 205 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 GNMTQ14749 295 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 FAM89BQ8N5H3 189 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 OR51D1Q8NGF3 324 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 OR52L2PQ8NGH6 319 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 SETD6Q8TBK2 473 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 FCGR1BQ92637 280 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 FAM3DQ96BQ1 224 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 R3HDM4Q96D70 268 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 EAF1Q96JC9 268 aaPredicted RBP13.36□□□□□ -0.27
HMGN4-201ENST00000377575 YPEL2Q96QA6 119 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 HSF4Q9ULV5 492 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 MGAT4AQ9UM21 535 aa13.36□□□□□ -0.27
HMGN4-201ENST00000377575 TRDV1A0A1B0GX56 115 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 NCBP2LA6PVI3 153 aaKnown RBP13.35□□□□□ -0.27
HMGN4-201ENST00000377575 SOCS1O15524 211 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 LANCL1O43813 399 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 MOSP00540 346 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 GALP22466 123 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 CLDN12P56749 244 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 LY6G6FQ5SQ64 297 aa13.35□□□□□ -0.27
HMGN4-201ENST00000377575 UBE2UQ5VVX9 321 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms