RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 SP6Q3SY56 376 aa12.54□□□□□ -0.4
UBA1-202ENST00000377269 PHYHD1Q5SRE7 291 aa12.54□□□□□ -0.4
UBA1-202ENST00000377269 KLHL24Q6TFL4 600 aa12.54□□□□□ -0.4
UBA1-202ENST00000377269 OR2C3Q8N628 320 aa12.54□□□□□ -0.4
UBA1-202ENST00000377269 OR51T1Q8NGJ9 327 aa12.54□□□□□ -0.4
UBA1-202ENST00000377269 SSC4DQ8WTU2 575 aa12.54□□□□□ -0.4
UBA1-202ENST00000377269 DHRS7CA6NNS2 312 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 ASCL1P50553 236 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 GNMTQ14749 295 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 DNM1P34Q6PK57 102 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 ZNF573Q86YE8 665 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 OR4D5Q8NGN0 318 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 PRRG4Q9BZD6 226 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 NBASA2RRP1 2371 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 TRAV1-1A0A0B4J248 108 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 AQP7O14520 342 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 RPLP1P05386 114 aaKnown RBP12.53□□□□□ -0.4
UBA1-202ENST00000377269 MDKP21741 143 aaPredicted RBP12.53□□□□□ -0.4
UBA1-202ENST00000377269 BLVRBP30043 206 aaPredicted RBP12.53□□□□□ -0.4
UBA1-202ENST00000377269 CCKARP32238 428 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 CLRN1P58418 232 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 ARL6IP1Q15041 203 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 RTL6Q6ICC9 239 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 ZNF880Q6PDB4 577 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 DPPA3Q6W0C5 159 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 LIAT1Q6ZQX7 453 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 TUSC5Q8IXB3 177 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 OR51E1Q8TCB6 317 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 PRORYQ9H606 182 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 CALHM2Q9HA72 323 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 SDF2L1Q9HCN8 221 aa12.53□□□□□ -0.4
UBA1-202ENST00000377269 MCTS1Q9ULC4 181 aaKnown RBP12.53□□□□□ -0.4
UBA1-202ENST00000377269 KIAA1549Q9HCM3 1950 aa12.52□□□□□ -0.4
UBA1-202ENST00000377269 SYNGR4O95473 234 aa12.52□□□□□ -0.4
UBA1-202ENST00000377269 IGHV3-9P01782 118 aa12.52□□□□□ -0.4
UBA1-202ENST00000377269 IGHG1P01857 330 aa12.52□□□□□ -0.4
UBA1-202ENST00000377269 TLE4Q04727 773 aa12.52□□□□□ -0.4
UBA1-202ENST00000377269 TMEM123Q8N131 208 aa12.52□□□□□ -0.4
UBA1-202ENST00000377269 TMEM171Q8WVE6 324 aa12.52□□□□□ -0.4
UBA1-202ENST00000377269 TMEM18Q96B42 140 aa12.52□□□□□ -0.4
UBA1-202ENST00000377269 MSI2Q96DH6 328 aaKnown RBP12.52□□□□□ -0.4
UBA1-202ENST00000377269 SLAMF6Q96DU3 332 aa12.52□□□□□ -0.4
UBA1-202ENST00000377269 ZNF837Q96EG3 531 aaPredicted RBP12.52□□□□□ -0.4
UBA1-202ENST00000377269 GNPNAT1Q96EK6 184 aaPredicted RBP12.52□□□□□ -0.4
UBA1-202ENST00000377269 REEP6Q96HR9 211 aa12.52□□□□□ -0.4
UBA1-202ENST00000377269 SF3B5Q9BWJ5 86 aaKnown RBP12.52□□□□□ -0.4
UBA1-202ENST00000377269 PRDM14Q9GZV8 571 aa12.52□□□□□ -0.4
UBA1-202ENST00000377269 USP24Q9UPU5 2620 aa12.52□□□□□ -0.41
UBA1-202ENST00000377269 PFN1P07737 140 aaKnown RBP12.52□□□□□ -0.41
UBA1-202ENST00000377269 CDAP32320 146 aa12.52□□□□□ -0.41
UBA1-202ENST00000377269 ZNF774Q6NX45 483 aa12.52□□□□□ -0.41
UBA1-202ENST00000377269 FAM180AQ6UWF9 173 aa12.52□□□□□ -0.41
UBA1-202ENST00000377269 TGIF2LYQ8IUE0 185 aa12.52□□□□□ -0.41
UBA1-202ENST00000377269 ZNF283Q8N7M2 679 aa12.52□□□□□ -0.41
UBA1-202ENST00000377269 DTD1Q8TEA8 209 aa12.52□□□□□ -0.41
UBA1-202ENST00000377269 RTN4IP1Q8WWV3 396 aaPredicted RBP12.52□□□□□ -0.41
UBA1-202ENST00000377269 ZNF701Q9NV72 531 aaPredicted RBP12.52□□□□□ -0.41
UBA1-202ENST00000377269 IGSF23A1L1A6 192 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 FAM24AA6NFZ4 105 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 PPP5D1E7EU14 171 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 ALDH3B1P43353 468 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 OR3A1P47881 315 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 RAB11AP62491 216 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 LY6DQ14210 128 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 OR10S1Q8NGN2 331 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 SNRNP40Q96DI7 357 aaKnown RBP12.51□□□□□ -0.41
UBA1-202ENST00000377269 LIME1Q9H400 295 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 HIST3H3Q16695 136 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 ZNF324BQ6AW86 544 aaPredicted RBP12.51□□□□□ -0.41
UBA1-202ENST00000377269 LGI3Q8N145 548 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 NPRL2Q8WTW4 380 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 SARAFQ96BY9 339 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 TRIB1Q96RU8 372 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 TM2D1Q9BX74 207 aa12.51□□□□□ -0.41
UBA1-202ENST00000377269 CISD1Q9NZ45 108 aaKnown RBP12.51□□□□□ -0.41
UBA1-202ENST00000377269 PHF3Q92576 2039 aaKnown RBP12.51□□□□□ -0.41
UBA1-202ENST00000377269 SLC22A20A6NK97 555 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 CST2P09228 141 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 P2RY6Q15077 328 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 AAED1Q7RTV5 226 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 GCNT2Q8N0V5 402 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 TMEM170AQ8WVE7 144 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 GPER1Q99527 375 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 MOB1AQ9H8S9 216 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 PLEKHF2Q9H8W4 249 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 ANXA10Q9UJ72 324 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 FREM1Q5H8C1 2179 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 EPG5Q9HCE0 2579 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 GTF3C1Q12789 2109 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 ZNF728P0DKX0 622 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 EDN3P14138 238 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 CMTM1Q8IZ96 169 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 ALKBH3Q96Q83 286 aaPredicted RBP12.5□□□□□ -0.41
UBA1-202ENST00000377269 GPR173Q9NS66 373 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 SLC7A11Q9UPY5 501 aa12.5□□□□□ -0.41
UBA1-202ENST00000377269 IGKV3D-15A0A087WSY6 115 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 IGKV1-9A0A0C4DH69 117 aa12.49□□□□□ -0.41
UBA1-202ENST00000377269 MMP7P09237 267 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms