RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 IGHV4-30-2A0A087WSY4 118 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 IGKV1D-8A0A087WSZ0 117 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A10PA6NDY2 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A18PA6NE21 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A16PA6NEW6 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A20PA6NIJ5 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A8PA6NJQ4 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 ZNF98A6NK75 572 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A7PA6NKC0 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A22PA8MWA6 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A12PA8MX19 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A5PA8MXJ8 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A23PA8MXZ1 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 RNASEK-C17orf49H0YIS7 233 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 KCNAB3O43448 404 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 NRASP01111 189 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 CD5P06127 495 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A15PP0C7V4 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A13PP0C7W8 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A14PP0C7W9 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 FAM90A24PP0C7X0 464 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 ZNF728P0DKX0 622 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 WNT5AP41221 380 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 SRSF7Q16629 238 aaKnown RBP eCLIP10.44□□□□□ -0.74
VRK3-202ENST00000377011 CLEC12BQ2HXU8 276 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 GPR157Q5UAW9 335 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 GGNBP1Q5YKI7 109 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 ZNF774Q6NX45 483 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 BTNL8Q6UX41 500 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 OSR2Q8N2R0 312 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 BOLLQ8N9W6 283 aaKnown RBP10.44□□□□□ -0.74
VRK3-202ENST00000377011 NUP37Q8NFH4 326 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 LYPD6BQ8NI32 183 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 GLYATL2Q8WU03 294 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 MAFIPQ8WZ33 124 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 GTF3AQ92664 365 aaKnown RBP10.44□□□□□ -0.74
VRK3-202ENST00000377011 SYT3Q9BQG1 590 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 ZNF286AQ9HBT8 521 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 SLC7A11Q9UPY5 501 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 NAV3Q8IVL0 2385 aa10.44□□□□□ -0.74
VRK3-202ENST00000377011 YLPM1P49750 1951 aaKnown RBP10.43□□□□□ -0.74
VRK3-202ENST00000377011 hCG_38984A0A1B0GV85 526 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 RNF223E7ERA6 249 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 FBXO24O75426 580 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 LCATP04180 440 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 FCGR2CP31995 323 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 SRPXP78539 464 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 KRTAP1-1Q07627 177 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 TMEM187Q14656 261 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 ALKBH6Q3KRA9 238 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 ABCA11PQ4W5N1 156 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 RPL7L1Q6DKI1 246 aaKnown RBP10.43□□□□□ -0.74
VRK3-202ENST00000377011 PRSS57Q6UWY2 283 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 Q6ZS49 121 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 FAM185AQ8N0U4 392 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 CCDC71LQ8N9Z2 235 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 BHLHE23Q8NDY6 225 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 SPSB4Q96A44 273 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 PLK3Q9H4B4 646 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 SMCO4Q9NRQ5 59 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 PRR13Q9NZ81 148 aa10.43□□□□□ -0.74
VRK3-202ENST00000377011 A0A096LNT2 108 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 ZNF816-ZNF321PA0A0X1KG74 233 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 ZNF850A8MQ14 1090 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 PDCD6O75340 191 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 MED6O75586 246 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 SEC11BP0C7V7 166 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 HTR5AP47898 357 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 AKR1C2P52895 323 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 DVL1P1P54792 670 aaPredicted RBP10.42□□□□□ -0.74
VRK3-202ENST00000377011 PIGPP57054 158 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 AKR1C1Q04828 323 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 IL13RA2Q14627 380 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 FAM76BQ5HYJ3 339 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 TMEM88Q6PEY1 159 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 LGI3Q8N145 548 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 Q8NFD4 153 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 MOB3AQ96BX8 217 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 C18orf12Q96KH6 178 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 POM121L2Q96KW2 1035 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 FAAP24Q9BTP7 215 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 OR2H1Q9GZK4 316 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 OR2S2Q9NQN1 319 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 FAM212BQ9NTI7 297 aaPredicted RBP10.42□□□□□ -0.74
VRK3-202ENST00000377011 FBXL17Q9UF56 701 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 FBXO9Q9UK97 447 aaPredicted RBP10.42□□□□□ -0.74
VRK3-202ENST00000377011 KPTNQ9Y664 436 aa10.42□□□□□ -0.74
VRK3-202ENST00000377011 IGKV1-27A0A075B6S5 117 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 BORCS7-ASMTA0A0B4J1R7 106 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 FAM230AA0A1W2PPH8 454 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 GPR137BO60478 399 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 FARS2O95363 451 aaKnown RBP10.41□□□□□ -0.74
VRK3-202ENST00000377011 LY6G6DO95868 133 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 NGFP01138 241 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 GLAP06280 429 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 MUC1P15941 1255 aaPredicted RBP10.41□□□□□ -0.74
VRK3-202ENST00000377011 CCNOP22674 350 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 GLP1RP43220 463 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 P2RY1P47900 373 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 RAB5CP51148 216 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms