RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ZNF880Q6PDB4 577 aa11.23□□□□□ -0.61
ACTN1-202ENST00000376839 FAM58AQ8N1B3 248 aa11.23□□□□□ -0.61
ACTN1-202ENST00000376839 ZNF525Q8N782 197 aa11.23□□□□□ -0.61
ACTN1-202ENST00000376839 OR10V1Q8NGI7 309 aa11.23□□□□□ -0.61
ACTN1-202ENST00000376839 GTF3AQ92664 365 aaKnown RBP11.23□□□□□ -0.61
ACTN1-202ENST00000376839 CABLES2Q9BTV7 478 aa11.23□□□□□ -0.61
ACTN1-202ENST00000376839 BOKQ9UMX3 212 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-202ENST00000376839 PPP1R3CQ9UQK1 317 aa11.23□□□□□ -0.61
ACTN1-202ENST00000376839 MED12LQ86YW9 2145 aa11.23□□□□□ -0.61
ACTN1-202ENST00000376839 CHD3Q12873 2000 aaKnown RBP11.22□□□□□ -0.61
ACTN1-202ENST00000376839 TRBV6-6A0A0A6YYG2 114 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 BCL2P10415 239 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 S100GP29377 79 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 WNT5AP41221 380 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 OR2M7Q8NG81 312 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 OR1K1Q8NGR3 316 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 SYNGR2O43760 224 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 NEURL1O76050 574 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 COX5BP10606 129 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 DUSP3P51452 185 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-202ENST00000376839 TESK1Q15569 626 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 C3AR1Q16581 482 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 OR2B11Q5JQS5 317 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 RCC1LQ96I51 464 aaKnown RBP11.22□□□□□ -0.61
ACTN1-202ENST00000376839 THOC3Q96J01 351 aaKnown RBP11.22□□□□□ -0.61
ACTN1-202ENST00000376839 PLK3Q9H4B4 646 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 GAR1Q9NY12 217 aaKnown RBP11.22□□□□□ -0.61
ACTN1-202ENST00000376839 PSENENQ9NZ42 101 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 SOD3P08294 240 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 SLC25A6P12236 298 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 ZNF16P17020 682 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-202ENST00000376839 CA6P23280 308 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 ZXDAP98168 799 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 C9orf152Q5JTZ5 239 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 SPATA46Q5T0L3 261 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 DCAF12Q5T6F0 453 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 OR2T2Q6IF00 324 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 FAM180AQ6UWF9 173 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 OR10G4Q8NGN3 311 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 SCGB1C1Q8TD33 95 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 SSX3Q99909 188 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 CISD1Q9NZ45 108 aaKnown RBP11.22□□□□□ -0.61
ACTN1-202ENST00000376839 OR14J1Q9UGF5 321 aa11.22□□□□□ -0.61
ACTN1-202ENST00000376839 TNRC18O15417 2968 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-202ENST00000376839 DIDO1Q9BTC0 2240 aaKnown RBP11.21□□□□□ -0.61
ACTN1-202ENST00000376839 ANKRD30BLA7E2S9 258 aa11.21□□□□□ -0.61
ACTN1-202ENST00000376839 PDGFBP01127 241 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-202ENST00000376839 S100A2P29034 98 aa11.21□□□□□ -0.61
ACTN1-202ENST00000376839 MAGEA5P43359 124 aa11.21□□□□□ -0.61
ACTN1-202ENST00000376839 GNG3P63215 75 aa11.21□□□□□ -0.61
ACTN1-202ENST00000376839 SSPNQ14714 243 aa11.21□□□□□ -0.61
ACTN1-202ENST00000376839 ZNF585BQ52M93 769 aa11.21□□□□□ -0.61
ACTN1-202ENST00000376839 TCEAL6Q6IPX3 200 aa11.21□□□□□ -0.61
ACTN1-202ENST00000376839 LINC00596Q86U02 117 aa11.21□□□□□ -0.61
ACTN1-202ENST00000376839 OR10D4PQ8NGN7 298 aa11.21□□□□□ -0.61
ACTN1-202ENST00000376839 CA5BP1Q8WTZ4 195 aa11.21□□□□□ -0.61
ACTN1-202ENST00000376839 GPR61Q9BZJ8 451 aa11.21□□□□□ -0.61
ACTN1-202ENST00000376839 A0A1W2PR80 420 aa11.21□□□□□ -0.62
ACTN1-202ENST00000376839 Q6P435 159 aa11.21□□□□□ -0.62
ACTN1-202ENST00000376839 C6orf15Q6UXA7 325 aaPredicted RBP11.21□□□□□ -0.62
ACTN1-202ENST00000376839 NUFIP2Q7Z417 695 aaKnown RBP11.21□□□□□ -0.62
ACTN1-202ENST00000376839 ZNF573Q86YE8 665 aa11.21□□□□□ -0.62
ACTN1-202ENST00000376839 TMEM105Q8N8V8 129 aa11.21□□□□□ -0.62
ACTN1-202ENST00000376839 ABHD5Q8WTS1 349 aa11.21□□□□□ -0.62
ACTN1-202ENST00000376839 APH1AQ96BI3 265 aa11.21□□□□□ -0.62
ACTN1-202ENST00000376839 SMOC1Q9H4F8 434 aa11.21□□□□□ -0.62
ACTN1-202ENST00000376839 KCNS2Q9ULS6 477 aa11.21□□□□□ -0.62
ACTN1-202ENST00000376839 DMRT1Q9Y5R6 373 aa11.21□□□□□ -0.62
ACTN1-202ENST00000376839 B4E171 279 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 DEGS1O15121 323 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 SYNGR4O95473 234 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 TSPAN7P41732 249 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 HNF4GQ14541 408 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 FRZBQ92765 325 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 LSM10Q969L4 123 aaKnown RBP11.2□□□□□ -0.62
ACTN1-202ENST00000376839 FAM210BQ96KR6 192 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 FAM173AQ9BQD7 235 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-202ENST00000376839 SIRPB1O00241 398 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 TRGC1P0CF51 173 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 ELLP55199 621 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-202ENST00000376839 C4orf17Q53FE4 359 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 VASH2Q86V25 355 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 ZNF383Q8NA42 475 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 OR51I2Q9H344 312 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 LOXL2Q9Y4K0 774 aa11.2□□□□□ -0.62
ACTN1-202ENST00000376839 KIAA2026Q5HYC2 2103 aa11.19□□□□□ -0.62
ACTN1-202ENST00000376839 IGHV3-64DA0A0J9YX35 117 aa11.19□□□□□ -0.62
ACTN1-202ENST00000376839 OR5B21A6NL26 309 aa11.19□□□□□ -0.62
ACTN1-202ENST00000376839 B4DEV8 164 aa11.19□□□□□ -0.62
ACTN1-202ENST00000376839 WDR1O75083 606 aa11.19□□□□□ -0.62
ACTN1-202ENST00000376839 MDKP21741 143 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-202ENST00000376839 ARR3P36575 388 aa11.19□□□□□ -0.62
ACTN1-202ENST00000376839 NKX6-1P78426 367 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-202ENST00000376839 TLE1Q04724 770 aa11.19□□□□□ -0.62
ACTN1-202ENST00000376839 PLP2Q04941 152 aa11.19□□□□□ -0.62
ACTN1-202ENST00000376839 SPANXN5Q5MJ07 72 aa11.19□□□□□ -0.62
ACTN1-202ENST00000376839 BEND4Q6ZU67 534 aa11.19□□□□□ -0.62
ACTN1-202ENST00000376839 HIST3H2BBQ8N257 126 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms