RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 H3BMH7 237 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 TRGC1P0CF51 173 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 PSG9Q00887 426 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 OR5M9Q8NGP3 310 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 SIGLEC7Q9Y286 467 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 OR51B2Q9Y5P1 312 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 PPYP01298 95 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 TMEM45BQ96B21 275 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 WIPI2Q9Y4P8 454 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 SUMO2P61956 95 aaKnown RBP10.26□□□□□ -0.77
VPS13A-205ENST00000376636 HIST1H1AQ02539 215 aaPredicted RBP10.26□□□□□ -0.77
VPS13A-205ENST00000376636 SCNM1Q9BWG6 230 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 C12orf73Q69YU5 71 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 CYB561D1Q8N8Q1 229 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 HEXA-AS1Q9H8Q6 139 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 RNF122Q9H9V4 155 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 FZR1Q9UM11 496 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 TMEM250H0YL14 139 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 PCMT1P22061 227 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 B4GALNT1Q00973 533 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 MEF2BQ02080 365 aaPredicted RBP10.25□□□□□ -0.77
VPS13A-205ENST00000376636 DDB2Q92466 427 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 RICTORQ6R327 1708 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 HYPMO75409 117 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 FGF5P12034 268 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 PSMG4Q5JS54 123 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 EWSR1Q01844 656 aaKnown RBP eCLIP10.25□□□□□ -0.77
VPS13A-205ENST00000376636 TMEM179BQ7Z7N9 219 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 OR10S1Q8NGN2 331 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 OR13C6PQ8NH95 151 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 AICDAQ9GZX7 198 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 CA11O75493 328 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 MFAP4P55083 255 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 SYT11Q9BT88 431 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 GPR35Q9HC97 309 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 F11RQ9Y624 299 aaKnown RBP10.25□□□□□ -0.77
VPS13A-205ENST00000376636 HKR1P10072 659 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 PHLDA1Q8WV24 401 aaPredicted RBP10.25□□□□□ -0.77
VPS13A-205ENST00000376636 NPVFQ9HCQ7 196 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 MYLKQ15746 1914 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 TMEM210A6NLX4 147 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 TSPO2Q5TGU0 170 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 SMIM14Q96QK8 99 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 SOD3P08294 240 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 SELENOTP62341 195 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 MDP1Q86V88 176 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 C1orf174Q8IYL3 243 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 FOXC2Q99958 501 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 SPTBN2O15020 2390 aa10.25□□□□□ -0.77
VPS13A-205ENST00000376636 LINC00862A6NCI5 91 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 C7orf71A4D174 169 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 ECSCRQ19T08 205 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 SAMD13Q5VXD3 122 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 ORAI1Q96D31 301 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 RBKSQ9H477 322 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 DMRT1Q9Y5R6 373 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 J3QR06 171 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 SLC23A3Q6PIS1 610 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 OR4D5Q8NGN0 318 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 MRGPRFQ96AM1 343 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 DOCK1Q14185 1865 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 ANKRD33Q7Z3H0 272 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.24□□□□□ -0.77
VPS13A-205ENST00000376636 GAPTQ8N292 157 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 TNFSF18Q9UNG2 199 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 ADAP1O75689 374 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 C9orf62Q8N4C0 152 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 ADAMTS5Q9UNA0 930 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 GTF3C1Q12789 2109 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 PCNX2A6NKB5 2137 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 TMEM262E9PQX1 116 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 H3BRM9 83 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 MZB1Q8WU39 189 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 TSPOP30536 169 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 ALKAL1Q6UXT8 129 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 TOX2Q96NM4 488 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 A1L4Q6 167 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 DEFB103AP81534 67 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 NIT1Q86X76 327 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 OR11H12B2RN74 326 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 WNT5AP41221 380 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 RPS4XP62701 263 aaKnown RBP10.24□□□□□ -0.77
VPS13A-205ENST00000376636 LILRA3Q8N6C8 439 aaPredicted RBP10.24□□□□□ -0.77
VPS13A-205ENST00000376636 OR11H1Q8NG94 326 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 OR2K2Q8NGT1 345 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 OR11H2Q8NH07 326 aa10.24□□□□□ -0.77
VPS13A-205ENST00000376636 MRPL18Q9H0U6 180 aaKnown RBP10.24□□□□□ -0.77
VPS13A-205ENST00000376636 ZDBF2Q9HCK1 2354 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 TRAV39A0A0B4J263 110 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 KLK8O60259 260 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 CA1P00915 261 aaPredicted RBP10.23□□□□□ -0.77
VPS13A-205ENST00000376636 ZNF32P17041 273 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 DMRTC1Q5HYR2 192 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 FGF22Q9HCT0 170 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 LILRA5A6NI73 299 aa10.23□□□□□ -0.77
VPS13A-205ENST00000376636 SRSF5Q13243 272 aaKnown RBP10.23□□□□□ -0.77
VPS13A-205ENST00000376636 EIF3IQ13347 325 aaKnown RBP10.23□□□□□ -0.77
VPS13A-205ENST00000376636 LINC00615Q96LM1 132 aaPredicted RBP10.23□□□□□ -0.77
VPS13A-205ENST00000376636 ZDHHC8Q9ULC8 765 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms