RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 BPNT1O95861 308 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 GLAP06280 429 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 EMX1Q04741 257 aaPredicted RBP12.38□□□□□ -0.43
SDHB-201ENST00000375499 CT45A1Q5HYN5 189 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 TCTEX1D4Q5JR98 221 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 SLC25A48Q6ZT89 311 aaKnown RBP12.38□□□□□ -0.43
SDHB-201ENST00000375499 C1QL4Q86Z23 238 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 C5orf56Q8N8D9 126 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 C8orf31Q8N9H6 132 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 OR52L2PQ8NGH6 319 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 CT45A3Q8NHU0 189 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 KCNG3Q8TAE7 436 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 AKR1E2Q96JD6 320 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 GNG12Q9UBI6 72 aa12.38□□□□□ -0.43
SDHB-201ENST00000375499 DNAH3Q8TD57 4116 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 FOXI3A8MTJ6 420 aaPredicted RBP12.37□□□□□ -0.43
SDHB-201ENST00000375499 SOCS1O15524 211 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 CA11O75493 328 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 FAM106CPP0CH98 169 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 TMEM11P17152 192 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 PSMA1P25786 263 aaKnown RBP12.37□□□□□ -0.43
SDHB-201ENST00000375499 ZNF137PP52743 207 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 OR10A3P58181 314 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 HES1Q14469 280 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 TRAM1Q15629 374 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 HMGN3Q15651 99 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 Q3ZCU0 254 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 C9orf152Q5JTZ5 239 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 KPRPQ5T749 579 aaPredicted RBP12.37□□□□□ -0.43
SDHB-201ENST00000375499 MOB3BQ86TA1 216 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 SVOPQ8N4V2 548 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 DTX3Q8N9I9 347 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 OR51D1Q8NGF3 324 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 RTN4IP1Q8WWV3 396 aaPredicted RBP12.37□□□□□ -0.43
SDHB-201ENST00000375499 NEDD4LQ96PU5 975 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 HDHD3Q9BSH5 251 aaPredicted RBP12.37□□□□□ -0.43
SDHB-201ENST00000375499 PLGRKTQ9HBL7 147 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 BLOC1S6Q9UL45 172 aa12.37□□□□□ -0.43
SDHB-201ENST00000375499 NOTCH3Q9UM47 2321 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 PEX14O75381 377 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 ARL6IP5O75915 188 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 NAPSAO96009 420 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 BLVRBP30043 206 aaPredicted RBP12.36□□□□□ -0.43
SDHB-201ENST00000375499 PPP1CCP36873 323 aaKnown RBP12.36□□□□□ -0.43
SDHB-201ENST00000375499 GABARAPL2P60520 117 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 EBI3Q14213 229 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 MORN2Q502X0 79 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 ODF3L1Q8IXM7 274 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 IZUMO1Q8IYV9 350 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 Q8N6K4 173 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 OR5AU1Q8NGC0 362 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 EAF1Q96JC9 268 aaPredicted RBP12.36□□□□□ -0.43
SDHB-201ENST00000375499 OR2S2Q9NQN1 319 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 NDUFB11Q9NX14 153 aa12.36□□□□□ -0.43
SDHB-201ENST00000375499 LDLRAD4O15165 306 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 OPN1MWP04001 364 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 GAPDHP04406 335 aaKnown RBP12.35□□□□□ -0.43
SDHB-201ENST00000375499 OPN1MW2P0DN77 364 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 OPN1MW3P0DN78 364 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 ARSBP15848 533 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 TMEM50BP56557 158 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 CD83Q01151 205 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 RAB11BQ15907 218 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 BEAN1Q3B7T3 259 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 HES5Q5TA89 166 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 ZNF880Q6PDB4 577 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 TRAT1Q6PIZ9 186 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 CD200R1LQ6Q8B3 271 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 OR2W3Q7Z3T1 314 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 NDUFA11Q86Y39 141 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 FAM89BQ8N5H3 189 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 PARP12Q9H0J9 701 aaKnown RBP12.35□□□□□ -0.43
SDHB-201ENST00000375499 AK3Q9UIJ7 227 aa12.35□□□□□ -0.43
SDHB-201ENST00000375499 A0A0B4J203 849 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 TMEM272A0A1B0GTI8 110 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 A0A1W2PRX2 142 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 H3BUI4 141 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 M0QZK8 103 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 DENRO43583 198 aaKnown RBP12.34□□□□□ -0.43
SDHB-201ENST00000375499 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 ZNF554Q86TJ5 538 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 NR2C2APQ86WQ0 139 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 SPARTQ8N0X7 666 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 FAM3DQ96BQ1 224 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 NOL4LQ96MY1 436 aaPredicted RBP12.34□□□□□ -0.43
SDHB-201ENST00000375499 ABHD14AQ9BUJ0 271 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.34□□□□□ -0.43
SDHB-201ENST00000375499 LINC00527Q9UJ94 153 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 JPT1Q9UK76 154 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 V9GY05 133 aa12.34□□□□□ -0.43
SDHB-201ENST00000375499 SMIM30A4D0T7 59 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 LINC01548A6NM66 108 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 G3V4G9 280 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 FGF16O43320 207 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 IL3RAP26951 378 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 VEGFCP49767 419 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 C2orf76Q3KRA6 126 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 MOGAT2Q3SYC2 334 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 PLAC9Q5JTB6 97 aa12.33□□□□□ -0.44
SDHB-201ENST00000375499 UBE2UQ5VVX9 321 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms