RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 NCMAPQ5T1S8 102 aa12.13□□□□□ -0.47
HMGA1-203ENST00000374116 MUCL1Q96DR8 90 aa12.13□□□□□ -0.47
HMGA1-203ENST00000374116 FAAP24Q9BTP7 215 aa12.13□□□□□ -0.47
HMGA1-203ENST00000374116 SCRT1Q9BWW7 348 aa12.13□□□□□ -0.47
HMGA1-203ENST00000374116 AK3Q9UIJ7 227 aa12.13□□□□□ -0.47
HMGA1-203ENST00000374116 LRBAP50851 2863 aa12.13□□□□□ -0.47
HMGA1-203ENST00000374116 HRNRQ86YZ3 2850 aaPredicted RBP12.12□□□□□ -0.47
HMGA1-203ENST00000374116 IGKV1D-8A0A087WSZ0 117 aa12.12□□□□□ -0.47
HMGA1-203ENST00000374116 ELOA3CA0A087WX78 387 aaPredicted RBP12.12□□□□□ -0.47
HMGA1-203ENST00000374116 IGKV1-12A0A0C4DH73 117 aa12.12□□□□□ -0.47
HMGA1-203ENST00000374116 IGKV1D-12P01611 117 aa12.12□□□□□ -0.47
HMGA1-203ENST00000374116 PI3P19957 117 aa12.12□□□□□ -0.47
HMGA1-203ENST00000374116 DDTP30046 118 aa12.12□□□□□ -0.47
HMGA1-203ENST00000374116 ARR3P36575 388 aa12.12□□□□□ -0.47
HMGA1-203ENST00000374116 MDP1Q86V88 176 aa12.12□□□□□ -0.47
HMGA1-203ENST00000374116 DECR2Q9NUI1 292 aa12.12□□□□□ -0.47
HMGA1-203ENST00000374116 HEATR1Q9H583 2144 aaKnown RBP12.12□□□□□ -0.47
HMGA1-203ENST00000374116 ABCA4P78363 2273 aa12.12□□□□□ -0.47
HMGA1-203ENST00000374116 M0R1B8 84 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 LY86O95711 162 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 SNRNP70P08621 437 aaKnown RBP12.11□□□□□ -0.47
HMGA1-203ENST00000374116 PET100P0DJ07 73 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 COX6B1P14854 86 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 RPS2P15880 293 aaKnown RBP12.11□□□□□ -0.47
HMGA1-203ENST00000374116 SULT1A1P50225 295 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 C1orf162Q8NEQ5 155 aaPredicted RBP12.11□□□□□ -0.47
HMGA1-203ENST00000374116 OR51F2Q8NH61 342 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 SSX3Q99909 188 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 ZNF2Q9BSG1 426 aaPredicted RBP12.11□□□□□ -0.47
HMGA1-203ENST00000374116 HDHD3Q9BSH5 251 aaPredicted RBP12.11□□□□□ -0.47
HMGA1-203ENST00000374116 REPIN1Q9BWE0 567 aaKnown RBP12.11□□□□□ -0.47
HMGA1-203ENST00000374116 NECAP2Q9NVZ3 263 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 ROS1P08922 2347 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 A0A1B0GW64 132 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 MSGN1A6NI15 193 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 GEMIN2O14893 280 aaKnown RBP12.11□□□□□ -0.47
HMGA1-203ENST00000374116 CST4P01036 141 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 CTSDP07339 412 aaPredicted RBP12.11□□□□□ -0.47
HMGA1-203ENST00000374116 CCL2P13500 99 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 NDUFB7P17568 137 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 MALLQ13021 153 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 KIAA0141Q14154 515 aaPredicted RBP12.11□□□□□ -0.47
HMGA1-203ENST00000374116 ANKRD55Q3KP44 614 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 ADAM5Q6NVV9 412 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 OR10AD1Q8NGE0 317 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 SECTM1Q8WVN6 248 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 APOBEC3DQ96AK3 386 aaPredicted RBP12.11□□□□□ -0.47
HMGA1-203ENST00000374116 GALNT14Q96FL9 552 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 POM121L2Q96KW2 1035 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 LURAP1Q96LR2 239 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 ST3GAL6Q9Y274 331 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 CSMD2Q7Z408 3487 aa12.11□□□□□ -0.47
HMGA1-203ENST00000374116 CYSRT1A8MQ03 144 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 ZNF850A8MQ14 1090 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 TSTD3H0UI37 97 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 SFTPBP07988 381 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 RD3LP0DJH9 198 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 OR5H8P0DN80 308 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 IDH3GP51553 393 aaPredicted RBP12.1□□□□□ -0.47
HMGA1-203ENST00000374116 IL15RAQ13261 267 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 PIGYQ3MUY2 71 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 DPPA2Q7Z7J5 298 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 FAM24BQ8N5W8 94 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 OR5R1Q8NH85 324 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 ISOC2Q96AB3 205 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 C2orf50Q96LR7 162 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 METTL8Q9H825 291 aaKnown RBP12.1□□□□□ -0.47
HMGA1-203ENST00000374116 TAF9BQ9HBM6 251 aa12.1□□□□□ -0.47
HMGA1-203ENST00000374116 C5orf49A4QMS7 147 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A10PA6NDY2 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A18PA6NE21 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A16PA6NEW6 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A20PA6NIJ5 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A8PA6NJQ4 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A7PA6NKC0 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A22PA8MWA6 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A12PA8MX19 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A5PA8MXJ8 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A23PA8MXZ1 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 PDCD6O75340 191 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 PLAUP00749 431 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A15PP0C7V4 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A13PP0C7W8 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A14PP0C7W9 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 FAM90A24PP0C7X0 464 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 LMO1P25800 156 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 SNCAP37840 140 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 AKR1C3P42330 323 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 RBM11P57052 281 aaKnown RBP12.09□□□□□ -0.47
HMGA1-203ENST00000374116 BSPH1Q075Z2 132 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 Q6ZRG5 221 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 SAXO1Q8IYX7 474 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 C17orf78Q8N4C9 275 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 ZNF611Q8N823 705 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 Q8NFD4 153 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 OR13D1Q8NGV5 346 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 PLPPR2Q96GM1 343 aa12.09□□□□□ -0.47
HMGA1-203ENST00000374116 MEGF10Q96KG7 1140 aa12.09□□□□□ -0.47
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