RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 C11orf40Q8WZ69 217 aa12.31□□□□□ -0.44
A1CF-202ENST00000373993 GMPPAQ96IJ6 420 aaPredicted RBP12.31□□□□□ -0.44
A1CF-202ENST00000373993 RAB40CQ96S21 281 aa12.31□□□□□ -0.44
A1CF-202ENST00000373993 TIMM9Q9Y5J7 89 aa12.31□□□□□ -0.44
A1CF-202ENST00000373993 SPTA1P02549 2419 aa12.31□□□□□ -0.44
A1CF-202ENST00000373993 TLN1Q9Y490 2541 aaKnown RBP12.31□□□□□ -0.44
A1CF-202ENST00000373993 A0A0U1RQV5 110 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 ZNF850A8MQ14 1090 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 ZNF705FA8MVS1 300 aaPredicted RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 MPPED1O15442 326 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 ZNF705DP0CH99 300 aaPredicted RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 ZNF705BP0CI00 300 aaPredicted RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 GZMHP20718 246 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 VDAC1P21796 283 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 RPL15P61313 204 aaKnown RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 RPL23P62829 140 aaKnown RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 DEFB109BQ30KR1 87 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 Q6ZS49 121 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 H1FNTQ75WM6 255 aaPredicted RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 SMIM15Q7Z3B0 74 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 OR1N1Q8NGS0 311 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 OR2AJ1Q8NGZ0 328 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 SCGB1C1Q8TD33 95 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 FOXN4Q96NZ1 517 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 GLRX2Q9NS18 164 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 MCTS1Q9ULC4 181 aaKnown RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 SLC45A2Q9UMX9 530 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 CLDN16Q9Y5I7 305 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 PXMP4Q9Y6I8 212 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 SPENQ96T58 3664 aaKnown RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 IGKV1D-8A0A087WSZ0 117 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 C3orf85A0A1B0GTC6 90 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 MS4A18H0YCH9 400 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 MMP7P09237 267 aaPredicted RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 WNT2P09544 360 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 PVRP15151 417 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 ZNF121P58317 390 aaPredicted RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 ENDOGQ14249 297 aaKnown RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 MS4A18Q3C1V0 323 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 SP6Q3SY56 376 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 ABHD12BQ7Z5M8 362 aaPredicted RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 LINC00346Q8IVM7 164 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 OR10S1Q8NGN2 331 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 TMEM37Q8WXS4 190 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 TMEM234Q8WY98 164 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 WDYHV1Q96HA8 205 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 AKIRIN1Q9H9L7 192 aaPredicted RBP12.3□□□□□ -0.44
A1CF-202ENST00000373993 ZNF286AQ9HBT8 521 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 MANBALQ9NQG1 85 aa12.3□□□□□ -0.44
A1CF-202ENST00000373993 FREM3P0C091 2139 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 IGKV1-9A0A0C4DH69 117 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 PHF1O43189 567 aaPredicted RBP12.29□□□□□ -0.44
A1CF-202ENST00000373993 TCF21O43680 179 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 SCRG1O75711 98 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 SLC37A1P57057 533 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 YPEL3P61236 119 aaPredicted RBP12.29□□□□□ -0.44
A1CF-202ENST00000373993 MEF2BQ02080 365 aaPredicted RBP12.29□□□□□ -0.44
A1CF-202ENST00000373993 MORN2Q502X0 79 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 C11orf42Q8N5U0 333 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 GATSQ8NAP1 163 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 OR8B12Q8NGG6 310 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 MAGT1Q9H0U3 335 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 NKX2-6A6NCS4 301 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 TMEM150CB9EJG8 249 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 TGFBR3LH3BV60 316 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 HRKO00198 91 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 HCRTR1O43613 425 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 OPN1LWP04000 364 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 CHRNB4P30926 498 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 RPS18P62269 152 aaKnown RBP12.29□□□□□ -0.44
A1CF-202ENST00000373993 ADIRFQ15847 76 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 ATP6V1FQ16864 119 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 PRTGQ2VWP7 1150 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 TPTE2P1Q5T6R2 138 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 ASCL4Q6XD76 172 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 KMT5CQ86Y97 462 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 ZNF695Q8IW36 515 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 ODF3L1Q8IXM7 274 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 TMEM123Q8N131 208 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 CT55Q8WUE5 264 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 TP53RKQ96S44 253 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 VAMP8Q9BV40 100 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 WWTR1Q9GZV5 400 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 SERINC1Q9NRX5 453 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 RPRMQ9NS64 109 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 B3GAT1Q9P2W7 334 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 WIPI2Q9Y4P8 454 aa12.29□□□□□ -0.44
A1CF-202ENST00000373993 A0A1W2PNV4 684 aa12.28□□□□□ -0.44
A1CF-202ENST00000373993 A0A1W2PP11 408 aa12.28□□□□□ -0.44
A1CF-202ENST00000373993 F6UZH7 168 aa12.28□□□□□ -0.44
A1CF-202ENST00000373993 MDH2P40926 338 aaKnown RBP12.28□□□□□ -0.44
A1CF-202ENST00000373993 HERV-K104P61576 105 aa12.28□□□□□ -0.44
A1CF-202ENST00000373993 RPP30P78346 268 aaKnown RBP12.28□□□□□ -0.44
A1CF-202ENST00000373993 UBE2V1Q13404 147 aa12.28□□□□□ -0.44
A1CF-202ENST00000373993 DEFB110Q30KQ9 67 aa12.28□□□□□ -0.44
A1CF-202ENST00000373993 NMSQ5H8A3 153 aa12.28□□□□□ -0.44
A1CF-202ENST00000373993 TMEM211Q6ICI0 200 aa12.28□□□□□ -0.44
A1CF-202ENST00000373993 CRIP3Q6Q6R5 217 aa12.28□□□□□ -0.44
A1CF-202ENST00000373993 TMEM144Q7Z5S9 345 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms