RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 DMBX1Q8NFW5 382 aa16.4■□□□□ 0.22
HDAC1-201ENST00000373548 SPIN2AQ99865 258 aa16.4■□□□□ 0.22
HDAC1-201ENST00000373548 SPIN2BQ9BPZ2 258 aa16.4■□□□□ 0.22
HDAC1-201ENST00000373548 KCNS2Q9ULS6 477 aa16.4■□□□□ 0.22
HDAC1-201ENST00000373548 PPP1R3CQ9UQK1 317 aa16.4■□□□□ 0.22
HDAC1-201ENST00000373548 RCL1Q9Y2P8 373 aaKnown RBP16.4■□□□□ 0.22
HDAC1-201ENST00000373548 POMT1Q9Y6A1 747 aa16.4■□□□□ 0.22
HDAC1-201ENST00000373548 TAAR5O14804 337 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 IL2RGP31785 369 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 GATA4P43694 442 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 PAX5Q02548 391 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 FAM53AQ6NSI3 398 aaPredicted RBP16.39■□□□□ 0.21
HDAC1-201ENST00000373548 OR52L2PQ8NGH6 319 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 OR13A1Q8NGR1 328 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 RND1Q92730 232 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 SEBOXQ9HB31 216 aaPredicted RBP16.39■□□□□ 0.21
HDAC1-201ENST00000373548 BARX1Q9HBU1 254 aaPredicted RBP16.39■□□□□ 0.21
HDAC1-201ENST00000373548 OR2S2Q9NQN1 319 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 CLEC18AA5D8T8 446 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 ABCD4O14678 606 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 IGHV1-46P01743 117 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 RPL7L1Q6DKI1 246 aaKnown RBP16.39■□□□□ 0.21
HDAC1-201ENST00000373548 CLEC18CQ8NCF0 446 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 FBXL17Q9UF56 701 aa16.39■□□□□ 0.21
HDAC1-201ENST00000373548 TMEM33P57088 247 aa16.38■□□□□ 0.21
HDAC1-201ENST00000373548 GNMTQ14749 295 aa16.38■□□□□ 0.21
HDAC1-201ENST00000373548 DRAM1Q8N682 238 aa16.38■□□□□ 0.21
HDAC1-201ENST00000373548 TMED6Q8WW62 240 aa16.38■□□□□ 0.21
HDAC1-201ENST00000373548 LURAP1Q96LR2 239 aa16.38■□□□□ 0.21
HDAC1-201ENST00000373548 VKORC1Q9BQB6 163 aa16.38■□□□□ 0.21
HDAC1-201ENST00000373548 SSTR5P35346 364 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 TNFAIP6P98066 277 aaPredicted RBP16.37■□□□□ 0.21
HDAC1-201ENST00000373548 BSPH1Q075Z2 132 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 DCTN5Q9BTE1 182 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 TOLLIPQ9H0E2 274 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 C11orf1Q9H5F2 150 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 DSCAMO60469 2012 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 NCOR2Q9Y618 2525 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 SERPINE2P07093 398 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 NKX2-1P43699 371 aaPredicted RBP16.37■□□□□ 0.21
HDAC1-201ENST00000373548 P2RY1P47900 373 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 EDDM3AQ14507 147 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 ERGIC1Q969X5 290 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 BSCL2Q96G97 398 aaPredicted RBP16.37■□□□□ 0.21
HDAC1-201ENST00000373548 GCM1Q9NP62 436 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 IL19Q9UHD0 177 aa16.37■□□□□ 0.21
HDAC1-201ENST00000373548 A0A0G2JRQ6 117 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 MEX3AA1L020 520 aaKnown RBP16.36■□□□□ 0.21
HDAC1-201ENST00000373548 FAM201AQ5SY85 155 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 THOC7Q6I9Y2 204 aaKnown RBP16.36■□□□□ 0.21
HDAC1-201ENST00000373548 CLEC9AQ6UXN8 241 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 SNX22Q96L94 193 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 SMIM3Q9BZL3 60 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 A0A1B0GW55 424 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 FGF16O43320 207 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 GPR137BO60478 399 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 IGKV1-39P01597 117 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 IGKV1D-39P04432 117 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 DUX4L2P0CJ85 424 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 DUX4L3P0CJ86 424 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 DUX4L4P0CJ87 422 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 DUX4L5P0CJ88 424 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 DUX4L6P0CJ89 424 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 DUX4L7P0CJ90 424 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 CXorf66Q5JRM2 361 aaPredicted RBP16.36■□□□□ 0.21
HDAC1-201ENST00000373548 GPR157Q5UAW9 335 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 HSD17B13Q7Z5P4 300 aaPredicted RBP16.36■□□□□ 0.21
HDAC1-201ENST00000373548 ARL11Q969Q4 196 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 DUX4Q9UBX2 424 aa16.36■□□□□ 0.21
HDAC1-201ENST00000373548 TRGV8A0A0C4DH27 118 aa16.35■□□□□ 0.21
HDAC1-201ENST00000373548 C15orf65H3BRN8 121 aa16.35■□□□□ 0.21
HDAC1-201ENST00000373548 ATXN7O15265 892 aaPredicted RBP16.35■□□□□ 0.21
HDAC1-201ENST00000373548 GAPDHP04406 335 aaKnown RBP16.35■□□□□ 0.21
HDAC1-201ENST00000373548 FGF2P09038 288 aa16.35■□□□□ 0.21
HDAC1-201ENST00000373548 CD80P33681 288 aa16.35■□□□□ 0.21
HDAC1-201ENST00000373548 PPP1CCP36873 323 aaKnown RBP16.35■□□□□ 0.21
HDAC1-201ENST00000373548 POLR2GP62487 172 aaKnown RBP eCLIP16.35■□□□□ 0.21
HDAC1-201ENST00000373548 ADIPOQQ15848 244 aa16.35■□□□□ 0.21
HDAC1-201ENST00000373548 SSX8Q7RTT4 187 aa16.35■□□□□ 0.21
HDAC1-201ENST00000373548 ANGPTL6Q8NI99 470 aa16.35■□□□□ 0.21
HDAC1-201ENST00000373548 RNF7Q9UBF6 113 aa16.35■□□□□ 0.21
HDAC1-201ENST00000373548 RNF150Q9ULK6 438 aa16.35■□□□□ 0.21
HDAC1-201ENST00000373548 MGST3O14880 152 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 EIF5AP63241 154 aaKnown RBP16.34■□□□□ 0.21
HDAC1-201ENST00000373548 ZNF585BQ52M93 769 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 ZNF645Q8N7E2 425 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 ZNRF1Q8ND25 227 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 RFESDQ8TAC1 157 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 FAM222BQ8WU58 562 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 NINJ1Q92982 152 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 C5orf30Q96GV9 206 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 ABHD14BQ96IU4 210 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 WFIKKN1Q96NZ8 548 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 OR2D2Q9H210 308 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 ESRP2Q9H6T0 727 aaKnown RBP16.34■□□□□ 0.21
HDAC1-201ENST00000373548 LIN7CQ9NUP9 197 aaKnown RBP16.34■□□□□ 0.21
HDAC1-201ENST00000373548 CHD8Q9HCK8 2581 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 DYSFO75923 2080 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 ODAMA1E959 279 aa16.34■□□□□ 0.21
HDAC1-201ENST00000373548 A8MXK9 166 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms