RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 IAPPP10997 89 aa20.1■□□□□ 0.81
CDK9-201ENST00000373264 PLA2G5P39877 138 aa20.1■□□□□ 0.81
CDK9-201ENST00000373264 KIR2DL2P43627 348 aaPredicted RBP20.1■□□□□ 0.81
CDK9-201ENST00000373264 OR8G1Q15617 311 aa20.1■□□□□ 0.81
CDK9-201ENST00000373264 AWAT1Q58HT5 328 aa20.1■□□□□ 0.81
CDK9-201ENST00000373264 RNASE11Q8TAA1 199 aaKnown RBP20.1■□□□□ 0.81
CDK9-201ENST00000373264 CADP27708 2225 aa20.1■□□□□ 0.81
CDK9-201ENST00000373264 CEACAM6P40199 344 aa20.1■□□□□ 0.81
CDK9-201ENST00000373264 FLI1Q01543 452 aaPredicted RBP20.1■□□□□ 0.81
CDK9-201ENST00000373264 ZNF585BQ52M93 769 aa20.1■□□□□ 0.81
CDK9-201ENST00000373264 UFSP2Q9NUQ7 469 aa20.1■□□□□ 0.81
CDK9-201ENST00000373264 HEATR1Q9H583 2144 aaKnown RBP20.09■□□□□ 0.81
CDK9-201ENST00000373264 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.09■□□□□ 0.81
CDK9-201ENST00000373264 TGFBR3Q03167 851 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 ZNF266Q14584 549 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 PRAMEF6Q5VXH4 476 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 Q6ZR03 302 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 MSL2Q9HCI7 577 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 AKAP13Q12802 2813 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 SPSB3Q6PJ21 355 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 Q6ZT83 130 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 TPRX1Q8N7U7 411 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 OR1L1Q8NH94 360 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 C14orf79Q96F83 325 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 SLC25A31Q9H0C2 315 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 PRELID3BQ9Y3B1 194 aa20.09■□□□□ 0.81
CDK9-201ENST00000373264 TXNL1O43396 289 aa20.08■□□□□ 0.81
CDK9-201ENST00000373264 MRPL49Q13405 166 aaKnown RBP20.08■□□□□ 0.81
CDK9-201ENST00000373264 OR2B11Q5JQS5 317 aa20.08■□□□□ 0.81
CDK9-201ENST00000373264 C11orf53Q8IXP5 236 aa20.08■□□□□ 0.81
CDK9-201ENST00000373264 WDR31Q8NA23 367 aa20.08■□□□□ 0.81
CDK9-201ENST00000373264 BCL2L14Q9BZR8 327 aa20.08■□□□□ 0.81
CDK9-201ENST00000373264 ASCL3Q9NQ33 180 aa20.08■□□□□ 0.81
CDK9-201ENST00000373264 STRAPQ9Y3F4 350 aaKnown RBP20.08■□□□□ 0.81
CDK9-201ENST00000373264 KPTNQ9Y664 436 aa20.08■□□□□ 0.81
CDK9-201ENST00000373264 RP1L1Q8IWN7 2480 aaPredicted RBP20.08■□□□□ 0.8
CDK9-201ENST00000373264 ATXN7O15265 892 aaPredicted RBP20.08■□□□□ 0.8
CDK9-201ENST00000373264 FABP6P51161 128 aa20.08■□□□□ 0.8
CDK9-201ENST00000373264 ALKBH2Q6NS38 261 aa20.08■□□□□ 0.8
CDK9-201ENST00000373264 PIP4P1Q86T03 277 aa20.08■□□□□ 0.8
CDK9-201ENST00000373264 METRNQ9UJH8 293 aa20.08■□□□□ 0.8
CDK9-201ENST00000373264 POLDIP2Q9Y2S7 368 aa20.08■□□□□ 0.8
CDK9-201ENST00000373264 DUXBA0A1W2PPF3 345 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 IQCF6A8MYZ5 107 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 M0R036 132 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 HAND1O96004 215 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 IGHG3P01860 377 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 FBP1P09467 338 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 RAC2P15153 192 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 AESQ08117 197 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 ZNF146Q15072 292 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 CD300LFQ8TDQ1 290 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 UMAD1C9J7I0 102 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 ARL16Q0P5N6 197 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 GUSBP1Q15486 140 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 DRAM1Q8N682 238 aa20.07■□□□□ 0.8
CDK9-201ENST00000373264 CHD3Q12873 2000 aaKnown RBP20.06■□□□□ 0.8
CDK9-201ENST00000373264 C7orf77A4D0Y5 90 aa20.06■□□□□ 0.8
CDK9-201ENST00000373264 HEXAP06865 529 aa20.06■□□□□ 0.8
CDK9-201ENST00000373264 RAB5CP51148 216 aa20.06■□□□□ 0.8
CDK9-201ENST00000373264 LINC00205P59089 165 aa20.06■□□□□ 0.8
CDK9-201ENST00000373264 HAGHQ16775 308 aa20.06■□□□□ 0.8
CDK9-201ENST00000373264 IL22RA2Q969J5 263 aa20.06■□□□□ 0.8
CDK9-201ENST00000373264 C5orf30Q96GV9 206 aa20.06■□□□□ 0.8
CDK9-201ENST00000373264 SH2D1BO14796 132 aa20.05■□□□□ 0.8
CDK9-201ENST00000373264 EIF3GO75821 320 aaKnown RBP eCLIP20.05■□□□□ 0.8
CDK9-201ENST00000373264 MAP1BP46821 2468 aaKnown RBP20.05■□□□□ 0.8
CDK9-201ENST00000373264 OR3A1P47881 315 aa20.05■□□□□ 0.8
CDK9-201ENST00000373264 OR52L2PQ8NGH6 319 aa20.05■□□□□ 0.8
CDK9-201ENST00000373264 CACNA1GO43497 2377 aa20.05■□□□□ 0.8
CDK9-201ENST00000373264 A6NLC8 198 aa20.05■□□□□ 0.8
CDK9-201ENST00000373264 RAMP3O60896 148 aa20.05■□□□□ 0.8
CDK9-201ENST00000373264 CEBPGP53567 150 aa20.05■□□□□ 0.8
CDK9-201ENST00000373264 MBNL3Q9NUK0 354 aaKnown RBP20.05■□□□□ 0.8
CDK9-201ENST00000373264 DOCK11Q5JSL3 2073 aa20.05■□□□□ 0.8
CDK9-201ENST00000373264 METTL15P1P0C7V9 234 aa20.04■□□□□ 0.8
CDK9-201ENST00000373264 RPL35P42766 123 aaKnown RBP20.04■□□□□ 0.8
CDK9-201ENST00000373264 ZNF808Q8N4W9 903 aaPredicted RBP20.04■□□□□ 0.8
CDK9-201ENST00000373264 RSG1Q9BU20 258 aa20.04■□□□□ 0.8
CDK9-201ENST00000373264 OPN3Q9H1Y3 402 aaPredicted RBP20.04■□□□□ 0.8
CDK9-201ENST00000373264 ICE1Q9Y2F5 2266 aa20.04■□□□□ 0.8
CDK9-201ENST00000373264 ATMQ13315 3056 aa20.04■□□□□ 0.8
CDK9-201ENST00000373264 NPIPB11E5RHQ5 1161 aa20.04■□□□□ 0.8
CDK9-201ENST00000373264 ARG1P05089 322 aa20.04■□□□□ 0.8
CDK9-201ENST00000373264 CECR9P0C854 216 aa20.04■□□□□ 0.8
CDK9-201ENST00000373264 S100GP29377 79 aa20.04■□□□□ 0.8
CDK9-201ENST00000373264 MDH2P40926 338 aaKnown RBP20.04■□□□□ 0.8
CDK9-201ENST00000373264 DEFB109BQ30KR1 87 aa20.04■□□□□ 0.8
CDK9-201ENST00000373264 A0A1B0GU03 582 aa20.03■□□□□ 0.8
CDK9-201ENST00000373264 C12orf77C9JDV5 145 aa20.03■□□□□ 0.8
CDK9-201ENST00000373264 NDUFA2O43678 99 aa20.03■□□□□ 0.8
CDK9-201ENST00000373264 RAB13P51153 203 aa20.03■□□□□ 0.8
CDK9-201ENST00000373264 HNF4GQ14541 408 aa20.03■□□□□ 0.8
CDK9-201ENST00000373264 HMGN3Q15651 99 aa20.03■□□□□ 0.8
CDK9-201ENST00000373264 INO80CQ6PI98 192 aaPredicted RBP20.03■□□□□ 0.8
CDK9-201ENST00000373264 THNSL2Q86YJ6 484 aa20.03■□□□□ 0.8
CDK9-201ENST00000373264 Q8IYB0 196 aa20.03■□□□□ 0.8
CDK9-201ENST00000373264 ABHD14BQ96IU4 210 aa20.03■□□□□ 0.8
CDK9-201ENST00000373264 RIF1Q5UIP0 2472 aaKnown RBP20.03■□□□□ 0.8
CDK9-201ENST00000373264 PTBP3O95758 552 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms