RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 OR4A5Q8NH83 315 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 IFNL4K9M1U5 179 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 ACAA1P09110 424 aaPredicted RBP10.05□□□□□ -0.8
VCL-202ENST00000372755 PKIAP61925 76 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 SHISA5Q8N114 240 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 LRRC3BQ96PB8 259 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 METTL26Q96S19 204 aa10.05□□□□□ -0.8
VCL-202ENST00000372755 CDX2Q99626 313 aaPredicted RBP10.05□□□□□ -0.8
VCL-202ENST00000372755 COL25A1Q9BXS0 654 aaPredicted RBP10.05□□□□□ -0.8
VCL-202ENST00000372755 DDX60LQ5H9U9 1706 aaKnown RBP10.05□□□□□ -0.8
VCL-202ENST00000372755 A8MWL6 223 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 ATP6V0CP27449 155 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 ZNF658BQ4V348 819 aaPredicted RBP10.04□□□□□ -0.8
VCL-202ENST00000372755 CBLN2Q8IUK8 224 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 MIXL1Q9H2W2 232 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 TRAV8-7A0A075B6U6 113 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 IGHV3-21A0A0B4J1V1 117 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 B4E171 279 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 WNT9BO14905 357 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 TSPAN7P41732 249 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 REG1BP48304 166 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 ZNF502Q8TBZ5 544 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 C16orf92Q96LL3 132 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 PAPPA2Q9BXP8 1791 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 LPAR2Q9HBW0 351 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.04□□□□□ -0.8
VCL-202ENST00000372755 MPDU1O75352 247 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 IGF2P01344 180 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 GGTLC2Q14390 218 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 CEACAM21Q3KPI0 293 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 KRTCAP3Q53RY4 240 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 MUC15Q8N387 334 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 ADAT3Q96EY9 351 aaPredicted RBP10.04□□□□□ -0.8
VCL-202ENST00000372755 CEACAM18A8MTB9 384 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 DIRC3C9JPN6 131 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 CD1AP06126 327 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 ZNF721Q8TF20 911 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 TNFSF18Q9UNG2 199 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 LAMB1P07942 1786 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 TRAV39A0A0B4J263 110 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 HRKO00198 91 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 CD74P04233 296 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 CXCL3P19876 107 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 SELENOTP62341 195 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 MGAT2Q10469 447 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 TM4SF20Q53R12 229 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 TXNDC17Q9BRA2 123 aa10.04□□□□□ -0.8
VCL-202ENST00000372755 FCGR3AP08637 254 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 NMUP48645 174 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 ABLIM2Q6H8Q1 611 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 ZNF383Q8NA42 475 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 OR11H7Q8NGC8 314 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 SOSTQ9BQB4 213 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 RBM38Q9H0Z9 239 aaKnown RBP10.03□□□□□ -0.8
VCL-202ENST00000372755 SDK1Q7Z5N4 2213 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 BTAF1O14981 1849 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 A0A1W2PPE3 182 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 CA2P00918 260 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 MT-ND6P03923 174 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 BCL2P10415 239 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 P2RY6Q15077 328 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 FAM27BQ5VT28 67 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 FADS6Q8N9I5 356 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 VN1R17PQ8TDU5 208 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 COPS9Q8WXC6 57 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 POM121Q96HA1 1249 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 PXMP4Q9Y6I8 212 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 A0A0U1RQV5 110 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 LOC389332A0A1B0GUA5 103 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 SPAARA0A1B0GVQ0 90 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 NPIPB8E9PQR5 432 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 GCGP01275 180 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 SCGB1A1P11684 91 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 COX6B1P14854 86 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 PRDM14Q9GZV8 571 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 IRF3Q14653 427 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 RNFT1Q5M7Z0 435 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 FAM53AQ6NSI3 398 aaPredicted RBP10.03□□□□□ -0.8
VCL-202ENST00000372755 RALYQ9UKM9 306 aaKnown RBP10.03□□□□□ -0.8
VCL-202ENST00000372755 LOC102724200A0A096LPH7 203 aaPredicted RBP10.03□□□□□ -0.8
VCL-202ENST00000372755 A0A1W2PPV9 198 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 C9orf172C9J069 976 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 H0Y980 276 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 GUCA2BQ16661 112 aa10.03□□□□□ -0.8
VCL-202ENST00000372755 ALX4Q9H161 411 aaPredicted RBP10.03□□□□□ -0.8
VCL-202ENST00000372755 DLL1O00548 723 aa10.02□□□□□ -0.8
VCL-202ENST00000372755 NGFRP08138 427 aa10.02□□□□□ -0.8
VCL-202ENST00000372755 UBE2V2Q15819 145 aa10.02□□□□□ -0.8
VCL-202ENST00000372755 ZAR1Q86SH2 424 aa10.02□□□□□ -0.8
VCL-202ENST00000372755 ADAMTS17Q8TE56 1095 aa10.02□□□□□ -0.8
VCL-202ENST00000372755 TRAF4Q9BUZ4 470 aaPredicted RBP10.02□□□□□ -0.8
VCL-202ENST00000372755 CHRNA10Q9GZZ6 450 aa10.02□□□□□ -0.8
VCL-202ENST00000372755 KLK13Q9UKR3 277 aa10.02□□□□□ -0.8
VCL-202ENST00000372755 MOB4Q9Y3A3 225 aa10.02□□□□□ -0.8
VCL-202ENST00000372755 SLX4Q8IY92 1834 aa10.02□□□□□ -0.8
VCL-202ENST00000372755 ZNF738Q8NE65 137 aa10.02□□□□□ -0.8
VCL-202ENST00000372755 LINC00862A6NCI5 91 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 UQCRFS1P47985 274 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 RAB9AP51151 201 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 MFAP2P55001 183 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms