RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 NOGQ13253 232 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 OR5I1Q13606 314 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 OSR2Q8N2R0 312 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 NFAM1Q8NET5 270 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 OR5D13Q8NGL4 314 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 IMMP2LQ96T52 175 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 DNAJC4Q9NNZ3 241 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 M0QZK8 103 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 CEACAM8P31997 349 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 VAMP2P63027 116 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 KRTAP27-1Q3LI81 207 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 LINC01551Q86U37 167 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 ADPRHL1Q8NDY3 354 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 TMEM234Q8WY98 164 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 OR4C12Q96R67 309 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 MSL2Q9HCI7 577 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 UBE2J1Q9Y385 318 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 ABCA7Q8IZY2 2146 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 M0R135 149 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 SIAH2O43255 324 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 ESDP10768 282 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 TNFRSF4P43489 277 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 PSG4Q00888 419 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 MMDQ15546 238 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 TMEM211Q6ICI0 200 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 Q6ZS49 121 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 TMPRSS7Q7RTY8 843 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 CCDC71LQ8N9Z2 235 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 OR10V1Q8NGI7 309 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 OR1L3Q8NH93 324 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 ZNF799Q96GE5 643 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 MS4A10Q96PG2 267 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 PAM16Q9Y3D7 125 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 PDCD6O75340 191 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 C1QTNF9P0C862 333 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 CHRNA7P36544 502 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 C17orf67Q0P5P2 114 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 ALKBH3Q96Q83 286 aaPredicted RBP9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 ELOVL5Q9NYP7 299 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 RNF150Q9ULK6 438 aa9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 DIDO1Q9BTC0 2240 aaKnown RBP9.92□□□□□ -0.82
SMARCA1-201ENST00000371121 VSTM2BA6NLU5 285 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 IAPPP10997 89 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 PSG2P11465 335 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 UBE2NP61088 152 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 C10orf128Q5T292 105 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 C1orf189Q5VU69 101 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 TMEM54Q969K7 222 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 WDYHV1Q96HA8 205 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 IL36GQ9NZH8 169 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 GON4LQ3T8J9 2241 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 AQP7P3A6NL99 342 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 HS3ST1O14792 307 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 SYNGR3O43761 229 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 CD82P27701 267 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 SELENOTP62341 195 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 ACOT6Q3I5F7 207 aaPredicted RBP9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 FAM78BQ5VT40 261 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 NEK7Q8TDX7 302 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 C10orf35Q96D05 121 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 OR51I2Q9H344 312 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 PLK3Q9H4B4 646 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 H0Y980 276 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 TMEM250H0YL14 139 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 ZNHIT1O43257 154 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 TDGF1P13385 188 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 SRP14P37108 136 aaKnown RBP9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 OR8B8Q15620 311 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 AGBL5Q8NDL9 886 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 FGFBP3Q8TAT2 258 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 MRGPRX4Q96LA9 322 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 FBXL7Q9UJT9 491 aa9.91□□□□□ -0.82
SMARCA1-201ENST00000371121 IGHV3-15A0A0B4J1V0 119 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 MSR1P21757 451 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 RPP30P78346 268 aaKnown RBP9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 SRPXP78539 464 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 CST9LP1Q5W188 147 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 TOMM20LQ6UXN7 152 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 SPSB1Q96BD6 273 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 PARD6AQ9NPB6 346 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 DUXBA0A1W2PPF3 345 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 PMS2P5A8MQ11 134 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 DKK1O94907 266 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 RAB7AP51149 207 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 HERV-K104P61576 105 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 RPS18P62269 152 aaKnown RBP9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 GNB1P62873 340 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 TESK1Q15569 626 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 ZNF585BQ52M93 769 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 HLA-DQA1Q5Y7H0 255 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 LYG1Q8N1E2 194 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 ZIC4Q8N9L1 334 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 Q8NFD4 153 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 OXGR1Q96P68 337 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 SLC25A22Q9H936 323 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 FOXJ2Q9P0K8 574 aa9.9□□□□□ -0.82
SMARCA1-201ENST00000371121 C5orf67F2Z3F1 127 aa9.9□□□□□ -0.83
SMARCA1-201ENST00000371121 PATE4P0C8F1 98 aa9.9□□□□□ -0.83
SMARCA1-201ENST00000371121 CD38P28907 300 aa9.9□□□□□ -0.83
SMARCA1-201ENST00000371121 FASLGP48023 281 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms