RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 TRGV5A0A0B4J1U4 118 aa11.71□□□□□ -0.54
CCDC144A-203ENST00000360495 C16orf47Q6ZP98 133 aaPredicted RBP11.71□□□□□ -0.54
CCDC144A-203ENST00000360495 SH3BGRL3Q9H299 93 aa11.71□□□□□ -0.54
CCDC144A-203ENST00000360495 IL36RNQ9UBH0 155 aa11.71□□□□□ -0.54
CCDC144A-203ENST00000360495 LOXL2Q9Y4K0 774 aa11.71□□□□□ -0.54
CCDC144A-203ENST00000360495 AMMECR1Q9Y4X0 333 aaPredicted RBP11.71□□□□□ -0.54
CCDC144A-203ENST00000360495 DANCRP0C864 163 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 EPHA8P29322 1005 aaPredicted RBP11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 KLF3P57682 345 aaPredicted RBP11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 MRGPRX3Q96LB0 322 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 LRRC61Q9BV99 259 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 HES7Q9BYE0 225 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 NPVFQ9HCQ7 196 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 TNFAIP6P98066 277 aaPredicted RBP11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 NUDT16L1Q9BRJ7 211 aaKnown RBP11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 UBR2Q8IWV8 1755 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 SPTY2D1-AS1A0A0U1RR47 76 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 FAM157AC9JC47 383 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 CKS2P33552 79 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 FBLIM1Q8WUP2 373 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 TMEM45BQ96B21 275 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 CARHSP1Q9Y2V2 147 aaKnown RBP11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 LIPT2A6NK58 231 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 OR4A8P0C604 315 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 FXYD3Q14802 87 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 TMEM196Q5HYL7 178 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 PQLC2Q6ZP29 291 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 Q8WTZ3 238 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 SLC25A38Q96DW6 304 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 MIEN1Q9BRT3 115 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 TMEM70Q9BUB7 260 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 MFRPQ9BY79 579 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 RNF122Q9H9V4 155 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 TMEM189A5PLL7 270 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 CDIPTO14735 213 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 TSPAN13O95857 204 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 SMIM13P0DJ93 91 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 PSG6Q00889 435 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 ZPLD1Q8TCW7 415 aa11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 ALKBH7Q9BT30 221 aaPredicted RBP11.7□□□□□ -0.54
CCDC144A-203ENST00000360495 SYNGR1O43759 233 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 ANKRD37Q7Z713 158 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 TAF15Q92804 592 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 MYH14Q7Z406 1995 aaKnown RBP11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 DPRXA6NFQ7 191 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 OR2A4O95047 310 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 SNRPCP09234 159 aaKnown RBP11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 MYF5P13349 255 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 GZMHP20718 246 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 TUSC5Q8IXB3 177 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 FAM169BQ8N8A8 192 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 OR2A7Q96R45 310 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 TMEM222Q9H0R3 208 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 J3QR06 171 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 MAS1LP35410 378 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 KLRB1Q12918 225 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 ZNF124Q15973 351 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 LIMS2Q7Z4I7 341 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 CCL17Q92583 94 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 NPIPB8E9PQR5 432 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 NPIPB7O75200 414 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 CXorf66Q5JRM2 361 aaPredicted RBP11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 SAMD13Q5VXD3 122 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 OR2I1PQ8NGU4 316 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 HARBI1Q96MB7 349 aa11.69□□□□□ -0.54
CCDC144A-203ENST00000360495 A8MXK9 166 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 MPDU1O75352 247 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 FHITP49789 147 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 TEX30Q5JUR7 227 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 PGLYRP4Q96LB8 373 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 COA4Q9NYJ1 87 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 SCN11AQ9UI33 1791 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 H0Y980 276 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 J3QT63 122 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 SLC25A17O43808 307 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 HOXB1P14653 301 aaPredicted RBP11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 GPR3P46089 330 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 CD200R1LQ6Q8B3 271 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 TRBV9A0A0B4J1U6 114 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 STAG3L3P0CL85 134 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 FSTP19883 344 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 ZAR1Q86SH2 424 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 OR1L8Q8NGR8 309 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 RBKSQ9H477 322 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 HIGD1AQ9Y241 93 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 TRAV38-1A0A0B4J264 116 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 CA11O75493 328 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 LYZL6O75951 148 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 IL4P05112 153 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 ARF6P62330 175 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 OR10AG1Q8NH19 301 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 C14orf144Q96I85 54 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 NPDC1Q9NQX5 325 aaPredicted RBP11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 OR51B2Q9Y5P1 312 aa11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 NUP214P35658 2090 aaPredicted RBP11.68□□□□□ -0.54
CCDC144A-203ENST00000360495 A1L4Q6 167 aa11.67□□□□□ -0.54
CCDC144A-203ENST00000360495 LMO7DNF2Z398 122 aa11.67□□□□□ -0.54
CCDC144A-203ENST00000360495 BGLAPP02818 100 aa11.67□□□□□ -0.54
CCDC144A-203ENST00000360495 ZNF735P0CB33 412 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms