RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ZNF221Q9UK13 617 aa11.5□□□□□ -0.57
PDLIM5-203ENST00000359265 NBEAL1Q6ZS30 2694 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 A0A1B0GW55 424 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 LYNX1G3V0Z9 82 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 IGHV2-70P01814 119 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 DUX4L2P0CJ85 424 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 DUX4L3P0CJ86 424 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 DUX4L4P0CJ87 422 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 DUX4L5P0CJ88 424 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 DUX4L6P0CJ89 424 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 DUX4L7P0CJ90 424 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 SULT1A3P0DMM9 295 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 SULT1A4P0DMN0 295 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 LYNX1P0DP58 116 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 DAOP14920 347 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 NDUFB7P17568 137 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 PI3P19957 117 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 GZMHP20718 246 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 VAMP1P23763 118 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 ZBTB25P24278 435 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 PPP1R1AQ13522 171 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 LRRC10Q5BKY1 277 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 DUX4L9Q6RFH8 374 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 Q71RC1 249 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 C12orf45Q8N5I9 185 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 CCDC71LQ8N9Z2 235 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 OR1L1Q8NH94 360 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 RAB1CQ92928 201 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 NINJ1Q92982 152 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 ARL11Q969Q4 196 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 TMEM230Q96A57 120 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 ZNF486Q96H40 463 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 TMEM246Q9BRR3 403 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 RTBDNQ9BSG5 229 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 SLC5A7Q9GZV3 580 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 OR1A1Q9P1Q5 309 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 KAAG1Q9UBP8 84 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 DUX4Q9UBX2 424 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 LPAR3Q9UBY5 353 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 OR2W1Q9Y3N9 320 aa11.49□□□□□ -0.57
PDLIM5-203ENST00000359265 DOCK11Q5JSL3 2073 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 FBN1P35555 2871 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 TRGV10A0A0A0MS01 117 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 C9orf170A2RU37 121 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 C15orf65H3BRN8 121 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 TNFRSF13BO14836 293 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 CD34P28906 385 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 CDKN1AP38936 164 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 CD83Q01151 205 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 DHODHQ02127 395 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 FAM185AQ8N0U4 392 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 OR11H7Q8NGC8 314 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 UBALD1Q8TB05 177 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 SECTM1Q8WVN6 248 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 DCTN5Q9BTE1 182 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 RSRP1Q9BUV0 290 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 CHODLQ9H9P2 273 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 RDH8Q9NYR8 311 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 MGAT4CQ9UBM8 478 aa11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 MAP1AP78559 2803 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-203ENST00000359265 YLPM1P49750 1951 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 hADV38S2A0JD32 116 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 ZNF729A6NN14 1252 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 A8MV72 311 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 OVOL3O00110 214 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 GPR31O00270 319 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 SFT2D2O95562 160 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 HEXAP06865 529 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 ANXA3P12429 323 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 S100GP29377 79 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 SSTR5P35346 364 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 LUMP51884 338 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 EFNA4P52798 201 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 PIGPP57054 158 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 HTD2P86397 168 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 MEF2CQ06413 473 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 TMEM30BQ3MIR4 351 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 LYPD2Q6UXB3 125 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 SGPP2Q8IWX5 399 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 SPICQ8N5J4 248 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 OR2AK2Q8NG84 335 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 OR10V1Q8NGI7 309 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 CASTOR1Q8WTX7 329 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 ST6GAL2Q96JF0 529 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 PHB2Q99623 299 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 CALYQ9NYX4 217 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 JPT1Q9UK76 154 aa11.47□□□□□ -0.57
PDLIM5-203ENST00000359265 JMJD1CQ15652 2540 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 A0A0B4J2A0 478 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 IGKV1D-13A0A0B4J2D9 117 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 TEX13DA0A0J9YY54 714 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 CRYM-AS1A6NIL9 109 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 BOLA2-SMG1P6H3BVE0 249 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 PPIHO43447 177 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 LY6HO94772 140 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 DUS4LO95620 317 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 IGKV1-13P0DP09 117 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 CEACAM6P40199 344 aa11.46□□□□□ -0.57
PDLIM5-203ENST00000359265 RND3P61587 244 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms