RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 SLC25A6P12236 298 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 CEBPDP49716 269 aaPredicted RBP12.54□□□□□ -0.4
GABPB1-202ENST00000359031 SULT1A2P50226 295 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 TUSC1Q2TAM9 212 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 IL34Q6ZMJ4 242 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 OR10Z1Q8NGY1 313 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 ERGIC1Q969X5 290 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 MUCL1Q96DR8 90 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 SMIM8Q96KF7 97 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 LUZP4Q9P127 313 aa12.54□□□□□ -0.4
GABPB1-202ENST00000359031 MGAQ8IWI9 3026 aa12.53□□□□□ -0.4
GABPB1-202ENST00000359031 TRAV39A0A0B4J263 110 aa12.53□□□□□ -0.4
GABPB1-202ENST00000359031 OOEPA6NGQ2 149 aa12.53□□□□□ -0.4
GABPB1-202ENST00000359031 SCO1O75880 301 aa12.53□□□□□ -0.4
GABPB1-202ENST00000359031 CRYAAP02489 173 aa12.53□□□□□ -0.4
GABPB1-202ENST00000359031 HEXAP06865 529 aa12.53□□□□□ -0.4
GABPB1-202ENST00000359031 SMIM3Q9BZL3 60 aa12.53□□□□□ -0.4
GABPB1-202ENST00000359031 LIN7CQ9NUP9 197 aaKnown RBP12.53□□□□□ -0.4
GABPB1-202ENST00000359031 CHD3Q12873 2000 aaKnown RBP12.53□□□□□ -0.4
GABPB1-202ENST00000359031 ATMQ13315 3056 aa12.53□□□□□ -0.4
GABPB1-202ENST00000359031 RNF212BA8MTL3 300 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 IGHV3-13P01766 116 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 SERPINE2P07093 398 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 GLRXP35754 106 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 RPS23P62266 143 aaKnown RBP12.52□□□□□ -0.4
GABPB1-202ENST00000359031 BLOC1S1P78537 153 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 EWSR1Q01844 656 aaKnown RBP eCLIP12.52□□□□□ -0.4
GABPB1-202ENST00000359031 PAX5Q02548 391 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 FAM90A1Q86YD7 464 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 PRR18Q8N4B5 295 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 OR2C3Q8N628 320 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 GPHA2Q96T91 129 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 TOLLIPQ9H0E2 274 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 SEBOXQ9HB31 216 aaPredicted RBP12.52□□□□□ -0.4
GABPB1-202ENST00000359031 UFSP2Q9NUQ7 469 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 KCNS2Q9ULS6 477 aa12.52□□□□□ -0.4
GABPB1-202ENST00000359031 RBM7Q9Y580 266 aaKnown RBP12.52□□□□□ -0.4
GABPB1-202ENST00000359031 HECTD1Q9ULT8 2610 aa12.52□□□□□ -0.41
GABPB1-202ENST00000359031 COL6A6A6NMZ7 2263 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 ZSCAN5BA6NJL1 495 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 IGLV2-14P01704 120 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 OR3A1P47881 315 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 VAMP2P63027 116 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 NKX6-1P78426 367 aaPredicted RBP12.51□□□□□ -0.41
GABPB1-202ENST00000359031 ID3Q02535 119 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 MSMO1Q15800 293 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 MST1LQ2TV78 715 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 TRAT1Q6PIZ9 186 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 ZBTB34Q8NCN2 500 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 BPIFCQ8NFQ6 507 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 OR2Z1Q8NG97 314 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 OR51H1Q8NH63 302 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 LRRC29Q8WV35 223 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 LSM10Q969L4 123 aaKnown RBP12.51□□□□□ -0.41
GABPB1-202ENST00000359031 GALMQ96C23 342 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 GINS3Q9BRX5 216 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 SLC25A31Q9H0C2 315 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 NAV2Q8IVL1 2488 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 A0A1B0GU03 582 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 C12orf77C9JDV5 145 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 SSSCA1O60232 199 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 PITX3O75364 302 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 MED6O75586 246 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 SEC11BP0C7V7 166 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 PSG2P11465 335 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 CFHR2P36980 270 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 CEACAM6P40199 344 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 TDGF1P3P51864 188 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 KLF3P57682 345 aaPredicted RBP12.51□□□□□ -0.41
GABPB1-202ENST00000359031 POLR2GP62487 172 aaKnown RBP eCLIP12.51□□□□□ -0.41
GABPB1-202ENST00000359031 COL10A1Q03692 680 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 MSMPQ1L6U9 139 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 FAM209AQ5JX71 171 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 BSCL2Q96G97 398 aaPredicted RBP12.51□□□□□ -0.41
GABPB1-202ENST00000359031 COQ2Q96H96 371 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 PLEKHF2Q9H8W4 249 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 PARP11Q9NR21 331 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 LYRM2Q9NU23 88 aaPredicted RBP12.51□□□□□ -0.41
GABPB1-202ENST00000359031 TP53TG5Q9Y2B4 290 aa12.51□□□□□ -0.41
GABPB1-202ENST00000359031 TMA7Q9Y2S6 64 aaKnown RBP12.51□□□□□ -0.41
GABPB1-202ENST00000359031 SRRM5B3KS81 715 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 PRRG2O14669 202 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 IL2RGP31785 369 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 GABRA2P47869 451 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 BAXQ07812 192 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 PJVKQ0ZLH3 352 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 PXDC1Q5TGL8 231 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 MRGPRGQ86SM5 289 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 ZNF645Q8N7E2 425 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 OR1L1Q8NH94 360 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 ABHD17AQ96GS6 310 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 WFDC1Q9HC57 220 aa12.5□□□□□ -0.41
GABPB1-202ENST00000359031 FAM212BQ9NTI7 297 aaPredicted RBP12.5□□□□□ -0.41
GABPB1-202ENST00000359031 IGLV3-9A0A075B6K5 115 aa12.49□□□□□ -0.41
GABPB1-202ENST00000359031 A8MXE2 369 aa12.49□□□□□ -0.41
GABPB1-202ENST00000359031 WRBO00258 174 aa12.49□□□□□ -0.41
GABPB1-202ENST00000359031 FBXO24O75426 580 aa12.49□□□□□ -0.41
GABPB1-202ENST00000359031 HBZP02008 142 aa12.49□□□□□ -0.41
GABPB1-202ENST00000359031 OR8U9P0C7N5 309 aa12.49□□□□□ -0.41
GABPB1-202ENST00000359031 LPAR6P43657 344 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms