RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 XIRP1Q702N8 1843 aaKnown RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 GPR37O15354 613 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 TRGC2P03986 189 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 CTSSP25774 331 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 PECRQ9BY49 303 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 TBC1D29Q9UFV1 150 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 MOGAT1Q96PD6 335 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 FAM103A1Q9BTL3 118 aaKnown RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 AP5S1Q9NUS5 200 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 G3V3Y1 287 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 MUC1P15941 1255 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 S100A4P26447 101 aaKnown RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 SRD5A2P31213 254 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 CSRP3P50461 194 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 HIST1H2BAQ96A08 127 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 GPR27Q9NS67 375 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 FUT9Q9Y231 359 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 TBL2Q9Y4P3 447 aaKnown RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 J3QT63 122 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 RAE1P78406 368 aaKnown RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 MEX3DQ86XN8 651 aaKnown RBP5.78□□□□□ -1.48
VPS13B-202ENST00000357162 STPG3Q8N7X2 389 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 PRDM13Q9H4Q3 707 aa5.78□□□□□ -1.48
VPS13B-202ENST00000357162 A0A1W2PPC4 97 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 TNFSF15O95150 251 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 CXCL10P02778 98 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 COL8A1P27658 744 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 MFAP2P55001 183 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 CD300CQ08708 224 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 FAM27BQ5VT28 67 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 COX14Q96I36 57 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 FAM90A9PA6NNJ1 464 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 S1PR2O95136 353 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 CNEP1R1Q8N9A8 125 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 CLDN14O95500 239 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 CTLA4P16410 223 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 IFITM3Q01628 133 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 DEFB110Q30KQ9 67 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 TEX29Q8N6K0 151 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 FOXB1Q99853 325 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 C2orf88Q9BSF0 95 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 WDR54Q9H977 334 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 A0A1W2PNV4 684 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 LMX1BO60663 402 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 EIF3GO75821 320 aaKnown RBP eCLIP5.77□□□□□ -1.49
VPS13B-202ENST00000357162 TEPPQ6URK8 271 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 SPEM1Q8N4L4 309 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.77□□□□□ -1.49
VPS13B-202ENST00000357162 TPPP3Q9BW30 176 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 MS4A18H0YCH9 400 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 MS4A18Q3C1V0 323 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 C9orf135Q5VTT2 229 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 QTRT1Q9BXR0 403 aaKnown RBP5.77□□□□□ -1.49
VPS13B-202ENST00000357162 GP6Q9HCN6 339 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 SIP14410 1827 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 IFITM10A6NMD0 228 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 HPRT1P00492 218 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 CIRBPQ14011 172 aaKnown RBP5.77□□□□□ -1.49
VPS13B-202ENST00000357162 UNQ9370/PRO34162Q6UXP9 181 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 NECAP1Q8NC96 275 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 PARP12Q9H0J9 701 aaKnown RBP5.77□□□□□ -1.49
VPS13B-202ENST00000357162 LRRC37AA6NMS7 1700 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 C7orf71A4D174 169 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 NDUFS8O00217 210 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 ATP5LO75964 103 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 CXCL2P19875 107 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 CEACAM6P40199 344 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 SPATA45Q537H7 98 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 NCMAPQ5T1S8 102 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 ASB10Q8WXI3 467 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 SPSB4Q96A44 273 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 TSPAN32Q96QS1 320 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 IGHMP01871 453 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 TMEM215Q68D42 235 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 TLNRD1Q9H1K6 362 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 PAM16Q9Y3D7 125 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 ATP6V0CP27449 155 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 LPAR6P43657 344 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 PRDX4Q13162 271 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 CALHM1Q8IU99 346 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 LINC00869P0C866 280 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 ERGP11308 486 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 ZP4Q12836 540 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 ZIC1Q15915 447 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 RNASEH2CQ8TDP1 164 aaKnown RBP5.77□□□□□ -1.49
VPS13B-202ENST00000357162 CXCL16Q9H2A7 254 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 FRRS1LQ9P0K9 344 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 PPP1R3CQ9UQK1 317 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 KCNMB2Q9Y691 235 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 LIPT2A6NK58 231 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 B4GALT1P15291 398 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 NPY1RP25929 384 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 MEOX1P50221 254 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 MVDP53602 400 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 RPL30P62888 115 aaKnown RBP5.77□□□□□ -1.49
VPS13B-202ENST00000357162 SLC35B1P78383 322 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 EFNB1P98172 346 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 EWSR1Q01844 656 aaKnown RBP eCLIP5.77□□□□□ -1.49
VPS13B-202ENST00000357162 FAAP20Q6NZ36 180 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 RARRES2Q99969 163 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms