RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 RFESDQ8TAC1 157 aa15.01□□□□□ -0.01
SMARCD3-202ENST00000356800 TOMM40LQ969M1 308 aa15.01□□□□□ -0.01
SMARCD3-202ENST00000356800 ARL11Q969Q4 196 aa15.01□□□□□ -0.01
SMARCD3-202ENST00000356800 ZNF486Q96H40 463 aaPredicted RBP15.01□□□□□ -0.01
SMARCD3-202ENST00000356800 RSRP1Q9BUV0 290 aa15.01□□□□□ -0.01
SMARCD3-202ENST00000356800 C19orf12Q9NSK7 152 aa15.01□□□□□ -0.01
SMARCD3-202ENST00000356800 OR6C3Q9NZP0 311 aa15.01□□□□□ -0.01
SMARCD3-202ENST00000356800 ARID1AO14497 2285 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 FAM172BPA6NC97 362 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 HEXAP06865 529 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 RPS2P15880 293 aaKnown RBP15□□□□□ -0.01
SMARCD3-202ENST00000356800 GZMHP20718 246 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 VAMP1P23763 118 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 ZNF565Q8N9K5 539 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 GALMQ96C23 342 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 YLPM1P49750 1951 aaKnown RBP15□□□□□ -0.01
SMARCD3-202ENST00000356800 MALRD1Q5VYJ5 2156 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 SFT2D2O95562 160 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 GPR6P46095 362 aaPredicted RBP15□□□□□ -0.01
SMARCD3-202ENST00000356800 SUPT4H1P63272 117 aaKnown RBP15□□□□□ -0.01
SMARCD3-202ENST00000356800 C17orf58Q2M2W7 97 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 ZNF787Q6DD87 383 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 HIST2H2BCQ6DN03 193 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 LDLRAD3Q86YD5 345 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 CORO2AQ92828 525 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 PHB2Q99623 299 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 ZNF436Q9C0F3 470 aaPredicted RBP15□□□□□ -0.01
SMARCD3-202ENST00000356800 PARP12Q9H0J9 701 aaKnown RBP15□□□□□ -0.01
SMARCD3-202ENST00000356800 MGAT4CQ9UBM8 478 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 OR2W1Q9Y3N9 320 aa15□□□□□ -0.01
SMARCD3-202ENST00000356800 IGKV1D-13A0A0B4J2D9 117 aa14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 CRYM-AS1A6NIL9 109 aa14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 WNT2P09544 360 aa14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 IGKV1-13P0DP09 117 aa14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 CD34P28906 385 aa14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 IL2RGP31785 369 aa14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 EIF2B2P49770 351 aaKnown RBP14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 RPL31P62899 125 aaKnown RBP14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 GNMTQ14749 295 aa14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 OR52L2PQ8NGH6 319 aa14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 TOLLIPQ9H0E2 274 aa14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 CALYQ9NYX4 217 aa14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 MIOXQ9UGB7 285 aa14.99□□□□□ -0.01
SMARCD3-202ENST00000356800 PTPN13Q12923 2485 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 TRGV10A0A0A0MS01 117 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 SPINT2O43291 252 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 SSTR2P30874 369 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 GNRHRP30968 328 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 PIGPP57054 158 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 MEF2CQ06413 473 aaPredicted RBP14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 ZNF273Q14593 569 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 ZFP69Q49AA0 526 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 ABCA11PQ4W5N1 156 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 TMEM200BQ69YZ2 307 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 H1FXQ92522 213 aaKnown RBP14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 MARVELD3Q96A59 401 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 NARFLQ9H6Q4 476 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 SLC2A9Q9NRM0 540 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 LINC00312Q9Y6C7 94 aa14.98□□□□□ -0.01
SMARCD3-202ENST00000356800 A0A0B4J2A0 478 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 KBTBD11-OT1A0A1B0GTJ5 212 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 hADV38S2A0JD32 116 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 OR2A4O95047 310 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 HLA-GP17693 338 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 SGPP2Q8IWX5 399 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 FAM185AQ8N0U4 392 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 UXS1Q8NBZ7 420 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 RTN4IP1Q8WWV3 396 aaPredicted RBP14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 NEIL1Q96FI4 390 aaPredicted RBP14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 DMRTB1Q96MA1 342 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 OR2A7Q96R45 310 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 LINC00574Q9H8X3 128 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 PATZ1Q9HBE1 687 aaKnown RBP14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 RDH8Q9NYR8 311 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 CLN8Q9UBY8 286 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 SHPKQ9UHJ6 478 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 ASH1LQ9NR48 2969 aaKnown RBP14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 IGHV3-43A0A0B4J1X8 118 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 DBX1A6NMT0 343 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 F5H0A9 414 aaPredicted RBP14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 F2RL2O00254 374 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 HSPA12AO43301 675 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 SLC22A5O76082 557 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 IGHV3-43DP0DP04 118 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 PAX1P15863 534 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 OMGP23515 440 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 CEACAM6P40199 344 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 ATP5J2P56134 94 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 RND3P61587 244 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 HTD2P86397 168 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 C2orf68Q2NKX9 166 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 C11orf88Q6PI97 169 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 OR8B3Q8NGG8 313 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 CASTOR1Q8WTX7 329 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 ASB13Q8WXK3 278 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 GALNT14Q96FL9 552 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 OR8B2Q96RD0 313 aa14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 UBE2J1Q9Y385 318 aaPredicted RBP14.97□□□□□ -0.01
SMARCD3-202ENST00000356800 ZNF729A6NN14 1252 aaPredicted RBP14.96□□□□□ -0.01
SMARCD3-202ENST00000356800 IFNA2P01563 188 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms