RNA–Protein interactions for RNA: ENST00000355233.9

PTPRD-201, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-201ENST00000355233 PRSS21Q9Y6M0 314 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 OTOL1A6NHN0 477 aaPredicted RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 OR4C45A6NMZ5 311 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 NPIPB6E9PJ23 425 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 F8VVB4 439 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 F8VWA3 439 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 TNFSF12O43508 249 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 CNIH1O95406 144 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 IFITM2Q01629 132 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 VASH2Q86V25 355 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 TSPAN32Q96QS1 320 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 RHNO1Q9BSD3 238 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 NDUFAF3Q9BU61 184 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 PRDM14Q9GZV8 571 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 G6PC2Q9NQR9 355 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 PDE4DIPQ5VU43 2346 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 ZC3H12DA2A288 527 aaKnown RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 K7EMI3 77 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 CA1P00915 261 aaPredicted RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 GATSQ8NAP1 163 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 FAM171A2A8MVW0 826 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 IQCF6A8MYZ5 107 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 H0YL77 283 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 WNT9BO14905 357 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 LMX1BO60663 402 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 PPYP01298 95 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 CRYBA1P05813 215 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 CISD3P0C7P0 127 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 TNFRSF1BP20333 461 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 NMUP48645 174 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 SNRPNP63162 240 aaKnown RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 LINC00469Q8N7U9 141 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 ADAT3Q96EY9 351 aaPredicted RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 ALKBH7Q9BT30 221 aaPredicted RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 MS4A5Q9H3V2 200 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 MAP1LC3AQ9H492 121 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 CLEC1BQ9P126 229 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 CLCF1Q9UBD9 225 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 NUP210LQ5VU65 1888 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 IGHV1OR15-9A0A0B4J2B8 117 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 CLDN14O95500 239 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 CEACAM1P13688 526 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 CA6P23280 308 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 MLF1P58340 268 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 PLP1P60201 277 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 PPP2CBP62714 309 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 PPP2CAP67775 309 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 SRYQ05066 204 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 MEF2CQ06413 473 aaPredicted RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 SSPNQ14714 243 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 CYP2G1PQ6ZSU1 146 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 SIRT6Q8N6T7 355 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 OR10G3Q8NGC4 313 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 OR52E5Q8NH55 327 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 APOBEC4Q8WW27 367 aaKnown RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 ARPC1AQ92747 370 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 PLA2G12AQ9BZM1 189 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 ZNF768Q9H5H4 540 aaKnown RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 RNF122Q9H9V4 155 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 FLRT3Q9NZU0 649 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 EML5Q05BV3 1969 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 J3QT63 122 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 K7ESM1 405 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 FAM157CP0CG43 387 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 RCC1P18754 421 aaPredicted RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 TSPOP30536 169 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 TGFBR1P36897 503 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 OR1D5P58170 312 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 ATG4DQ86TL0 474 aaPredicted RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 ETFBKMTQ8IXQ9 262 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 ZNF511Q8NB15 262 aa4.31□□□□□ -1.72
PTPRD-201ENST00000355233 C1orf162Q8NEQ5 155 aaPredicted RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 MBNL1Q9NR56 388 aaKnown RBP4.31□□□□□ -1.72
PTPRD-201ENST00000355233 H3BML4 177 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 ZNF205O95201 554 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 WNT1P04628 370 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 SMIM13P0DJ93 91 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 MPGP29372 298 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 OPRK1P41145 380 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 CSRP3P50461 194 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 GZMMP51124 257 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 CMC4P56277 68 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-201ENST00000355233 CACNG7P62955 275 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 C1orf185Q5T7R7 199 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 DHRS13Q6UX07 377 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 OR4P4Q8NGL7 312 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 GATAD1Q8WUU5 269 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 DERL1Q9BUN8 251 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 ZNF703Q9H7S9 590 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-201ENST00000355233 TNFRSF19Q9NS68 423 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 MASP2O00187 686 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 ZIC2O95409 532 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-201ENST00000355233 F13BP05160 661 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 AGAP20933 346 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 PSMB5P28074 263 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 RPS27LQ71UM5 84 aaKnown RBP4.3□□□□□ -1.72
PTPRD-201ENST00000355233 TMEM130Q8N3G9 435 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 VN1R17PQ8TDU5 208 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 OR4C12Q96R67 309 aa4.3□□□□□ -1.72
PTPRD-201ENST00000355233 ST6GALNAC2Q9UJ37 374 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms